RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 PRPSAP2O60256 369 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 RNASEH1O60930 286 aaKnown RBP23.41■■□□□ 1.34
TDP1-216ENST00000556867 CREB5Q02930 508 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 PIGHQ14442 188 aaPredicted RBP23.41■■□□□ 1.34
TDP1-216ENST00000556867 ELAVL3Q14576 367 aaKnown RBP23.41■■□□□ 1.34
TDP1-216ENST00000556867 PLA2G2CQ5R387 149 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 ERMARDQ5T6L9 678 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 CYP2U1Q7Z449 544 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 NIPA2Q8N8Q9 360 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 RTL3Q8N8U3 475 aaKnown RBP23.41■■□□□ 1.34
TDP1-216ENST00000556867 ATP13A1Q9HD20 1204 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 GPATCH2LQ9NWQ4 482 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 PCSK1NQ9UHG2 260 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 ANAPC7Q9UJX3 599 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 USP18Q9UMW8 372 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 SCML1Q9UN30 329 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 NUMA1Q14980 2115 aa23.41■■□□□ 1.34
TDP1-216ENST00000556867 CXorf51AA0A1B0GTR3 108 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 WASH4PA8MWX3 477 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 CREB3O43889 395 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 AKR1B10O60218 316 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 ZMPSTE24O75844 475 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 DNTTP04053 509 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 SRCP12931 536 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 VAV1P15498 845 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 PTGER3P43115 390 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 CLCN6P51797 869 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 DLG2Q15700 870 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 TTC31Q49AM3 519 aaPredicted RBP23.4■■□□□ 1.34
TDP1-216ENST00000556867 LYSMD4Q5XG99 296 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 STK40Q8N2I9 435 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 TOE1Q96GM8 510 aaKnown RBP23.4■■□□□ 1.34
TDP1-216ENST00000556867 CCDC42Q96M95 316 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 FAM129BQ96TA1 746 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 SPON2Q9BUD6 331 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 ACE2Q9BYF1 805 aaPredicted RBP23.4■■□□□ 1.34
TDP1-216ENST00000556867 MAGEH1Q9H213 219 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 CATSPERBQ9H7T0 1116 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 NHEJ1Q9H9Q4 299 aaPredicted RBP23.4■■□□□ 1.34
TDP1-216ENST00000556867 IP6K2Q9UHH9 426 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 DNAI1Q9UI46 699 aa23.4■■□□□ 1.34
TDP1-216ENST00000556867 CBX4O00257 560 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 FGF10O15520 208 aaPredicted RBP23.39■■□□□ 1.33
TDP1-216ENST00000556867 FOXD2O60548 495 aaPredicted RBP23.39■■□□□ 1.33
TDP1-216ENST00000556867 RAMP2O60895 175 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 NDUFS2O75306 463 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 MT-CO1P00395 513 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 ZNF806P0C7X5 589 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 GLDCP23378 1020 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 TPI1P60174 286 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 CST6Q15828 149 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 CA9Q16790 459 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 RETSATQ6NUM9 610 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 TC2NQ8N9U0 490 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 ATP11CQ8NB49 1132 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 CTNNBL1Q8WYA6 563 aaPredicted RBP23.39■■□□□ 1.33
TDP1-216ENST00000556867 ARHGEF2Q92974 986 aaKnown RBP23.39■■□□□ 1.33
TDP1-216ENST00000556867 PACSIN1Q9BY11 444 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 PABPC3Q9H361 631 aaKnown RBP23.39■■□□□ 1.33
TDP1-216ENST00000556867 DHX35Q9H5Z1 703 aaKnown RBP23.39■■□□□ 1.33
TDP1-216ENST00000556867 VPS45Q9NRW7 570 aa23.39■■□□□ 1.33
TDP1-216ENST00000556867 DMXL1Q9Y485 3027 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 H2AFZP0C0S5 128 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 ACVRL1P37023 503 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 DPP6P42658 865 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 ARF5P84085 180 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 LMNB2Q03252 620 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 SLC20A2Q08357 652 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 CCDC6Q16204 474 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 ACCSLQ4AC99 568 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 IL31Q6EBC2 164 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 LINGO4Q6UY18 593 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 PRR23CQ6ZRP0 262 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 Q6ZVU0 165 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 USP30Q70CQ3 517 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 H2AFVQ71UI9 128 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 ARMCX6Q7L4S7 300 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 SLC41A1Q8IVJ1 513 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 ZNF564Q8TBZ8 553 aaPredicted RBP23.38■■□□□ 1.33
TDP1-216ENST00000556867 ZNF419Q96HQ0 510 aaPredicted RBP23.38■■□□□ 1.33
TDP1-216ENST00000556867 KCTD15Q96SI1 283 aaPredicted RBP23.38■■□□□ 1.33
TDP1-216ENST00000556867 UVRAGQ9P2Y5 699 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 PI4KAP42356 2102 aa23.38■■□□□ 1.33
TDP1-216ENST00000556867 SPTBN4Q9H254 2564 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 K7ERQ8 282 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 MYO1FO00160 1098 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 ALOX15BO15296 676 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 SERPINH1P50454 418 aaKnown RBP23.37■■□□□ 1.33
TDP1-216ENST00000556867 ZNF135P52742 658 aaPredicted RBP23.37■■□□□ 1.33
TDP1-216ENST00000556867 ZNF33AQ06730 810 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 DAB2IPQ5VWQ8 1189 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 PEAR1Q5VY43 1037 aaPredicted RBP23.37■■□□□ 1.33
TDP1-216ENST00000556867 DSG4Q86SJ6 1040 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 MMAAQ8IVH4 418 aaKnown RBP23.37■■□□□ 1.33
TDP1-216ENST00000556867 CADM4Q8NFZ8 388 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 OR8D1Q8WZ84 308 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 FOXJ1Q92949 421 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 BTBD6Q96KE9 485 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 HSPA12BQ96MM6 686 aa23.37■■□□□ 1.33
TDP1-216ENST00000556867 GPR174Q9BXC1 333 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms