RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MYCP01106 439 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-211ENST00000556648 HMBSP08397 361 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 KITP10721 976 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 SELPP16109 830 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 CCNCP24863 283 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 SERPINB3P29508 390 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 ALDH3A1P30838 453 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 PAPOLAP51003 745 aaKnown RBP10.32□□□□□ -0.76
TMEM260-211ENST00000556648 COG7P83436 770 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 IRF9Q00978 393 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 EFEMP1Q12805 493 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 NAB1Q13506 487 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 PPP2R5DQ14738 602 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 PCLAFQ15004 111 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 FASTKD1Q53R41 847 aaKnown RBP10.32□□□□□ -0.76
TMEM260-211ENST00000556648 HSP90AA5PQ58FG0 334 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 CLNKQ7Z7G1 428 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 ALYREFQ86V81 257 aaKnown RBP10.32□□□□□ -0.76
TMEM260-211ENST00000556648 KCNMB4Q86W47 210 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 CIR1Q86X95 450 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-211ENST00000556648 SPNS2Q8IVW8 549 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 PLD6Q8N2A8 252 aaKnown RBP10.32□□□□□ -0.76
TMEM260-211ENST00000556648 IPMKQ8NFU5 416 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 ZNF398Q8TD17 642 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 BCL7CQ8WUZ0 217 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-211ENST00000556648 SKA1Q96BD8 255 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 SLC7A6OSQ96CW6 309 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-211ENST00000556648 MYEOVQ96EZ4 313 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 C8orf48Q96LL4 319 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 VAT1Q99536 393 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 IL12RB2Q99665 862 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 RBBP8Q99708 897 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 TSEN34Q9BSV6 310 aaKnown RBP10.32□□□□□ -0.76
TMEM260-211ENST00000556648 GLOD4Q9HC38 313 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 SNX15Q9NRS6 342 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 C20orf96Q9NUD7 363 aaPredicted RBP10.32□□□□□ -0.76
TMEM260-211ENST00000556648 TXLNGQ9NUQ3 528 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 ARL8BQ9NVJ2 186 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 TMEM161AQ9NX61 479 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 TMEM216Q9P0N5 145 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 BAIAP2L1Q9UHR4 511 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 ADAM28Q9UKQ2 775 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 SOX13Q9UN79 622 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 MTO1Q9Y2Z2 717 aaKnown RBP10.32□□□□□ -0.76
TMEM260-211ENST00000556648 PCDHB5Q9Y5E4 795 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 SCN5AQ14524 2016 aa10.32□□□□□ -0.76
TMEM260-211ENST00000556648 FNDC1Q4ZHG4 1894 aaPredicted RBP10.31□□□□□ -0.76
TMEM260-211ENST00000556648 FGF10O15520 208 aaPredicted RBP10.31□□□□□ -0.76
TMEM260-211ENST00000556648 PLIN3O60664 434 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 SNNO75324 88 aaPredicted RBP10.31□□□□□ -0.76
TMEM260-211ENST00000556648 CNTN5O94779 1100 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 IL1BP01584 269 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 PROCP04070 461 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 MYL2P10916 166 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 FGF3P11487 239 aaPredicted RBP10.31□□□□□ -0.76
TMEM260-211ENST00000556648 HOXD10P28358 340 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 SKIV2L2P42285 1042 aaKnown RBP10.31□□□□□ -0.76
TMEM260-211ENST00000556648 CHRNA4P43681 627 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 TBX4P57082 545 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 PDE1BQ01064 536 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 MRPL58Q14197 206 aaKnown RBP10.31□□□□□ -0.76
TMEM260-211ENST00000556648 SNCBQ16143 134 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 PSMD5Q16401 504 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 DEFB115Q30KQ5 88 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 ALFQ53S48 1182 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 MBLAC2Q68D91 279 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 DENND5AQ6IQ26 1287 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 MSANTD2Q6P1R3 559 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 RNF19BQ6ZMZ0 732 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 TAS1R1Q7RTX1 841 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 KDELC2Q7Z4H8 507 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 ARID3BQ8IVW6 561 aaPredicted RBP10.31□□□□□ -0.76
TMEM260-211ENST00000556648 KLHDC8BQ8IXV7 354 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 RTL3Q8N8U3 475 aaKnown RBP10.31□□□□□ -0.76
TMEM260-211ENST00000556648 TET1Q8NFU7 2136 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 SLC39A13Q96H72 371 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 SERPINB11Q96P15 392 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 CPNE1Q99829 537 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 TBL1YQ9BQ87 522 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 LRMDAQ9H2I8 198 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 CATSPERBQ9H7T0 1116 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 NOD2Q9HC29 1040 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 TTC24A2A3L6 582 aaPredicted RBP10.31□□□□□ -0.76
TMEM260-211ENST00000556648 MTMR11A4FU01 709 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 ERI2A8K979 691 aaKnown RBP10.31□□□□□ -0.76
TMEM260-211ENST00000556648 MATN3O15232 486 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 GLRA3O75311 464 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 PMPCBO75439 489 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 TGDSO95455 350 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 PEX11BO96011 259 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 ARRB2P32121 409 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 MAGEA12P43365 314 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 LIMK2P53671 638 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 PRPSAP1Q14558 356 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 POU6F1Q14863 301 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 MS4A13Q5J8X5 152 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 RTP2Q5QGT7 225 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 GRTP1Q5TC63 336 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 RASIP1Q5U651 963 aa10.31□□□□□ -0.76
TMEM260-211ENST00000556648 FSTL4Q6MZW2 842 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms