RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 AP4E1Q9UPM8 1137 aa15.56■□□□□ 0.08
ACTN1-217ENST00000556203 HS3ST2Q9Y278 367 aa15.56■□□□□ 0.08
ACTN1-217ENST00000556203 FAM186AA6NE01 2351 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 PTPRZ1P23471 2315 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-217ENST00000556203 K7ERQ8 282 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 RAMP2O60895 175 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 PCK1P35558 622 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 ACVRL1P37023 503 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 ETFBP38117 255 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 ZNF75DP51815 510 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 ZNF33AQ06730 810 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 SEMA3BQ13214 749 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 PIGHQ14442 188 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-217ENST00000556203 ELAVL3Q14576 367 aaKnown RBP15.55■□□□□ 0.08
ACTN1-217ENST00000556203 ACAP1Q15027 740 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 CA9Q16790 459 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 TTC31Q49AM3 519 aaPredicted RBP15.55■□□□□ 0.08
ACTN1-217ENST00000556203 PLA2G2CQ5R387 149 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 ERMARDQ5T6L9 678 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 RETSATQ6NUM9 610 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 PRR23CQ6ZRP0 262 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 PIGKQ92643 395 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 CCDC42Q96M95 316 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 FAM129BQ96TA1 746 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 NCAPGQ9BPX3 1015 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 PACSIN1Q9BY11 444 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 PABPC3Q9H361 631 aaKnown RBP15.55■□□□□ 0.08
ACTN1-217ENST00000556203 DHX35Q9H5Z1 703 aaKnown RBP15.55■□□□□ 0.08
ACTN1-217ENST00000556203 CATSPERBQ9H7T0 1116 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 VPS45Q9NRW7 570 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 IP6K2Q9UHH9 426 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.55■□□□□ 0.08
ACTN1-217ENST00000556203 RIF1Q5UIP0 2472 aaKnown RBP15.55■□□□□ 0.08
ACTN1-217ENST00000556203 CKAP5Q14008 2032 aa15.55■□□□□ 0.08
ACTN1-217ENST00000556203 EP300Q09472 2414 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-217ENST00000556203 ATXN2Q99700 1313 aaKnown RBP15.54■□□□□ 0.08
ACTN1-217ENST00000556203 BNIP3LO60238 219 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 ZMPSTE24O75844 475 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 ZNF806P0C7X5 589 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 SRCP12931 536 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 PSMD8P48556 350 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 CLCN6P51797 869 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 TPI1P60174 286 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 ARF5P84085 180 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 LMNB2Q03252 620 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 SF3A2Q15428 464 aaKnown RBP15.54■□□□□ 0.08
ACTN1-217ENST00000556203 CST6Q15828 149 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 Q6ZVU0 165 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 CYP4V2Q6ZWL3 525 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-217ENST00000556203 SLC41A1Q8IVJ1 513 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 ZNF564Q8TBZ8 553 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-217ENST00000556203 GANCQ8TET4 914 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 CTNNBL1Q8WYA6 563 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-217ENST00000556203 ARHGEF2Q92974 986 aaKnown RBP15.54■□□□□ 0.08
ACTN1-217ENST00000556203 ZNF419Q96HQ0 510 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-217ENST00000556203 HSPA12BQ96MM6 686 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 KCTD15Q96SI1 283 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-217ENST00000556203 GPR174Q9BXC1 333 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 ACE2Q9BYF1 805 aaPredicted RBP15.54■□□□□ 0.08
ACTN1-217ENST00000556203 SPTLC3Q9NUV7 552 aa15.54■□□□□ 0.08
ACTN1-217ENST00000556203 WASH4PA8MWX3 477 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 EIF3CLB5ME19 914 aaKnown RBP15.53■□□□□ 0.08
ACTN1-217ENST00000556203 MYO1FO00160 1098 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 EEF2KO00418 725 aaKnown RBP15.53■□□□□ 0.08
ACTN1-217ENST00000556203 MID1O15344 667 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 FGF10O15520 208 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-217ENST00000556203 SMAD6O43541 496 aaKnown RBP15.53■□□□□ 0.08
ACTN1-217ENST00000556203 IL1BP01584 269 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 H2AFZP0C0S5 128 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 TCF4P15884 667 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 ITPKAP23677 461 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 IL1R2P27930 398 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 SLC8A1P32418 973 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 HTR7P34969 479 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 SERPINH1P50454 418 aaKnown RBP15.53■□□□□ 0.08
ACTN1-217ENST00000556203 POLD3Q15054 466 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-217ENST00000556203 SMTNL2Q2TAL5 461 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 KCNT1Q5JUK3 1230 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 TCEAL6Q6IPX3 200 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 H2AFVQ71UI9 128 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 PSTKQ8IV42 348 aaKnown RBP15.53■□□□□ 0.08
ACTN1-217ENST00000556203 NIPA2Q8N8Q9 360 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 TC2NQ8N9U0 490 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 C12orf50Q8NA57 414 aaPredicted RBP15.53■□□□□ 0.08
ACTN1-217ENST00000556203 OR8D1Q8WZ84 308 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 TCEAL3Q969E4 200 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 MRFAP1L1Q96HT8 127 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 EIF3CQ99613 913 aaKnown RBP15.53■□□□□ 0.08
ACTN1-217ENST00000556203 MAGEH1Q9H213 219 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 TMEM74BQ9NUR3 256 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 FBXL12Q9NXK8 326 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 CTTNBP2NLQ9P2B4 639 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 SCML1Q9UN30 329 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 NCKAP1Q9Y2A7 1128 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 ACTL7AQ9Y615 435 aa15.53■□□□□ 0.08
ACTN1-217ENST00000556203 SDK1Q7Z5N4 2213 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 ABCA7Q8IZY2 2146 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 A0A1W2PP55 124 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 TMEM253P0C7T8 217 aa15.52■□□□□ 0.08
ACTN1-217ENST00000556203 C5AR1P21730 350 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms