RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 OR52K2Q8NGK3 314 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 RPLP0P6Q8NHW5 317 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 C18orf8Q96DM3 657 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 MRRFQ96E11 262 aaKnown RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 SUDS3Q9H7L9 328 aaPredicted RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 NLRC4Q9NPP4 1024 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 SPATA6Q9NWH7 488 aaPredicted RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 PPARGC1AQ9UBK2 798 aaKnown RBP4.03□□□□□ -1.76
LINC00648-202ENST00000555985 STRIP2Q9ULQ0 834 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 TBC1D30Q9Y2I9 924 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 HS3ST4Q9Y661 456 aa4.03□□□□□ -1.76
LINC00648-202ENST00000555985 TP53BP1Q12888 1972 aaPredicted RBP4.03□□□□□ -1.77
LINC00648-202ENST00000555985 NEDD8-MDP1E9PL57 170 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ATG13O75143 517 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ANP32DO95626 131 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 APODP05090 189 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 MDH1P40925 334 aaKnown RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 CXCL12P48061 93 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 SEC24CP53992 1094 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 HDAC4P56524 1084 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ELF3P78545 371 aaPredicted RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 CDK17Q00537 523 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 CKAP4Q07065 602 aaKnown RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 BLMHQ13867 455 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 CRY1Q16526 586 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 DCAF6Q58WW2 860 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 FSCBQ5H9T9 825 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 PLA2G2CQ5R387 149 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ACBD5Q5T8D3 534 aaPredicted RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 TTC39BQ5VTQ0 682 aaPredicted RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 HHATQ5VTY9 493 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 PAPD7Q5XG87 772 aaKnown RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 EGFLAMQ63HQ2 1017 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 GRAMD4Q6IC98 578 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 TSSK4Q6SA08 328 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 CHST9Q7L1S5 443 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 STRADAQ7RTN6 431 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 SPATA21Q7Z572 469 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 C14orf80Q86SX3 495 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ACRBPQ8NEB7 543 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 B4GALNT2Q8NHY0 566 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 JOSD2Q8TAC2 188 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 CCHCR1Q8TD31 782 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ZFAND2BQ8WV99 257 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 RUBCNQ92622 972 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 IGSF8Q969P0 613 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 NTAN1Q96AB6 310 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 TBC1D31Q96DN5 1066 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ALS2CR12Q96Q35 445 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 HAPLN3Q96S86 360 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 TBCBQ99426 244 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 PSMB7Q99436 277 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 BBS2Q9BXC9 721 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 HAUS4Q9H6D7 363 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 RETREG1Q9H6L5 497 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 PAPOLBQ9NRJ5 636 aaKnown RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 USP36Q9P275 1121 aaKnown RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 MBD1Q9UIS9 605 aaPredicted RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 SAR1BQ9Y6B6 198 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 PLXNA2O75051 1894 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 MUC6Q6W4X9 2439 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 WASH4PA8MWX3 477 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 LAMTOR5O43504 91 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 TIMM44O43615 452 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ZNF821O75541 412 aaPredicted RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 TACR2P21452 398 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 CD70P32970 193 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 HARS2P49590 506 aaKnown RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 DGKGP49619 791 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ATXN1P54253 815 aaKnown RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 NRLP54845 237 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 SNX16P57768 344 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 LSM11P83369 360 aaKnown RBP eCLIP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ZBED6P86452 979 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 CSTF1Q05048 431 aaKnown RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 MAMLD1Q13495 774 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 RIPK1Q13546 671 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 CAMK2GQ13555 558 aaPredicted RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 DMC1Q14565 340 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 EIF4HQ15056 248 aaKnown RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 MAP7D1Q3KQU3 841 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 C2CD6Q53TS8 623 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 SH3PXD2AQ5TCZ1 1133 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 AFMIDQ63HM1 303 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 FBXL22Q6P050 247 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 RFWD3Q6PCD5 774 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ERICH1Q86X53 443 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 TMTC1Q8IUR5 882 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 SH2D3CQ8N5H7 860 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ALLCQ8N6M5 410 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 NIPA2Q8N8Q9 360 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 HJURPQ8NCD3 748 aaPredicted RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 TSEN2Q8NCE0 465 aaKnown RBP4.02□□□□□ -1.77
LINC00648-202ENST00000555985 ADAM32Q8TC27 787 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 FNIP1Q8TF40 1166 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 RNF139Q8WU17 664 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 GAB3Q8WWW8 586 aa4.02□□□□□ -1.77
LINC00648-202ENST00000555985 P3H4Q92791 437 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms