RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 TBC1D3IA0A087WXS9 549 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 TBC1D3EA0A087X179 549 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 TBC1D3KA0A087X1G2 549 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 TBC1D3FA6NER0 549 aaPredicted RBP20.25■□□□□ 0.83
PRKCH-219ENST00000555906 TBC1D3LB9A6J9 549 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 WNT9AO14904 365 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 MCF2LO15068 1137 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 RTN2O75298 545 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 ADCY5O95622 1261 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 TBC1D3HP0C7X1 549 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 CYP11B1P15538 503 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 EPHA8P29322 1005 aaPredicted RBP20.25■□□□□ 0.83
PRKCH-219ENST00000555906 GABRB2P47870 512 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 ARRB1P49407 418 aaPredicted RBP20.25■□□□□ 0.83
PRKCH-219ENST00000555906 RAPGEF1Q13905 1077 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 DRAP1Q14919 205 aaPredicted RBP20.25■□□□□ 0.83
PRKCH-219ENST00000555906 SHBQ15464 509 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 DLG2Q15700 870 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 SMAD1Q15797 465 aaKnown RBP20.25■□□□□ 0.83
PRKCH-219ENST00000555906 ACCSLQ4AC99 568 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 ACBD5Q5T8D3 534 aaPredicted RBP20.25■□□□□ 0.83
PRKCH-219ENST00000555906 TBC1D3GQ6DHY5 549 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 TBC1D3CQ6IPX1 549 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 ZNF683Q8IZ20 524 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 TBC1D3Q8IZP1 549 aaPredicted RBP20.25■□□□□ 0.83
PRKCH-219ENST00000555906 PIP4K2CQ8TBX8 421 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 SAP25Q8TEE9 199 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 C2orf49Q9BVC5 232 aaPredicted RBP20.25■□□□□ 0.83
PRKCH-219ENST00000555906 MUC3BQ9H195 1237 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 PDCL3Q9H2J4 239 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 WDCPQ9H6R7 721 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 ERVMER34-1Q9H9K5 563 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 ANLNQ9NQW6 1124 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 DKK4Q9UBT3 224 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 SARDHQ9UL12 918 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 DMTF1Q9Y222 760 aa20.25■□□□□ 0.83
PRKCH-219ENST00000555906 I6L893 689 aaPredicted RBP20.24■□□□□ 0.83
PRKCH-219ENST00000555906 PLK4O00444 970 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 CNTN5O94779 1100 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 LSM8O95777 96 aaKnown RBP20.24■□□□□ 0.83
PRKCH-219ENST00000555906 F9P00740 461 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 RHOCP08134 193 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 TFE3P19532 575 aaPredicted RBP20.24■□□□□ 0.83
PRKCH-219ENST00000555906 KRT83P78385 493 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 CNTN1Q12860 1018 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 ALFQ53S48 1182 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 FAM102AQ5T9C2 384 aaPredicted RBP20.24■□□□□ 0.83
PRKCH-219ENST00000555906 SETD3Q86TU7 594 aaPredicted RBP20.24■□□□□ 0.83
PRKCH-219ENST00000555906 PRPF39Q86UA1 669 aaKnown RBP20.24■□□□□ 0.83
PRKCH-219ENST00000555906 IQCHQ86VS3 1027 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 GATAD2AQ86YP4 633 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 MFSD2AQ8NA29 543 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 DCAF4L2Q8NA75 395 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 CCDC114Q96M63 670 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 PSMB7Q99436 277 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 SIK2Q9H0K1 926 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 PREBQ9HCU5 417 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 CHMP5Q9NZZ3 219 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 ARHGAP20Q9P2F6 1191 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 LHX6Q9UPM6 363 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 PCDHGA1Q9Y5H4 931 aa20.24■□□□□ 0.83
PRKCH-219ENST00000555906 ARID1BQ8NFD5 2236 aaPredicted RBP20.24■□□□□ 0.83
PRKCH-219ENST00000555906 CHD5Q8TDI0 1954 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 TLR4O00206 839 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 ITGAVP06756 1048 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 SRCP12931 536 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 CLCN6P51797 869 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 RNASE9P60153 205 aaKnown RBP20.23■□□□□ 0.83
PRKCH-219ENST00000555906 DEUP1Q05D60 604 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 SLC25A52Q3SY17 297 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 KLHDC7AQ5VTJ3 777 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 XYLT1Q86Y38 959 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 MSANTD4Q8NCY6 345 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 MDM1Q8TC05 714 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 C18orf8Q96DM3 657 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 TBCBQ99426 244 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 NAA15Q9BXJ9 866 aaKnown RBP20.23■□□□□ 0.83
PRKCH-219ENST00000555906 VPS51Q9UID3 782 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 GPSM3Q9Y4H4 160 aa20.23■□□□□ 0.83
PRKCH-219ENST00000555906 IGLV3-10A0A075B6K4 115 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 F8VZ95 297 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 ENC1O14682 589 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 MAGEC1O60732 1142 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 ZNF18P17022 549 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 RXRGP48443 463 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 KCNMA1Q12791 1236 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 OVGP1Q12889 678 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 SETMARQ53H47 684 aaPredicted RBP20.22■□□□□ 0.83
PRKCH-219ENST00000555906 HSP90AA4PQ58FG1 418 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 PRAMEF14Q5SWL7 426 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 LRRC31Q6UY01 552 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 CNDP2Q96KP4 475 aaKnown RBP20.22■□□□□ 0.83
PRKCH-219ENST00000555906 C1orf74Q96LT6 269 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 NUP62CLQ9H1M0 184 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 FARP1Q9Y4F1 1045 aaPredicted RBP20.22■□□□□ 0.83
PRKCH-219ENST00000555906 ATRXP46100 2492 aa20.22■□□□□ 0.83
PRKCH-219ENST00000555906 KNTC1P50748 2209 aa20.21■□□□□ 0.83
PRKCH-219ENST00000555906 DRGXA6NNA5 263 aa20.21■□□□□ 0.83
PRKCH-219ENST00000555906 SNAP91O60641 907 aa20.21■□□□□ 0.83
PRKCH-219ENST00000555906 CTSLP07711 333 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms