RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ARFGAP1Q8N6T3 406 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 CELF5Q8N6W0 485 aaKnown RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 FAM172AQ8WUF8 416 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 TEKT4Q8WW24 435 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 ATG4AQ8WYN0 398 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 RSPH1Q8WYR4 309 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 HSPH1Q92598 858 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 ART4Q93070 314 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 SMARCD1Q96GM5 515 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 SNF8Q96H20 258 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 DDX23Q9BUQ8 820 aaKnown RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 CALN1Q9BXU9 219 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 B3GNT5Q9BYG0 378 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 CRTAC1Q9NQ79 661 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 CHST7Q9NS84 486 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 KRT82Q9NSB4 513 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 TMEM161AQ9NX61 479 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 ACTR10Q9NZ32 417 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 FAM153AQ9UHL3 310 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 CDH22Q9UJ99 828 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 ANAPC5Q9UJX4 755 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 STAP1Q9ULZ2 295 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 ZNF148Q9UQR1 794 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 R3HDM2Q9Y2K5 976 aaKnown RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 PCDHB7Q9Y5E2 793 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 TIMM13Q9Y5L4 95 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 TSC2P49815 1807 aa7.05□□□□□ -1.28
SLIRP-204ENST00000555890 FBN1P35555 2871 aaKnown RBP7.05□□□□□ -1.28
SLIRP-204ENST00000555890 MYBPHLA2RUH7 354 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 GOLGA6L10A6NI86 522 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 C3orf70A6NLC5 250 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 GOLGA8KD6RF30 607 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 TMEM189-UBE2V1I3L0A0 370 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CLDN5O00501 218 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 PER2O15055 1255 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 MDM4O15151 490 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 POLR3GO15318 223 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CST8O60676 142 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 DAB1O75553 588 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 ENDOD1O94919 500 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 KRT14P02533 472 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 ITGAVP06756 1048 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CEACAM1P13688 526 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CR2P20023 1033 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 IL1R2P27930 398 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 TKTP29401 623 aaKnown RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 ECHS1P30084 290 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 BRCC3P46736 316 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 RPL21P46778 160 aaKnown RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 TKTL1P51854 596 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CDH6P55285 790 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 MAP3K7CLP57077 242 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 GABPB1Q06547 395 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 ADIGQ0VDE8 80 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 TAF5Q15542 800 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 DDR2Q16832 855 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CDO1Q16878 200 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 SPRED3Q2MJR0 410 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 C15orf59Q2T9L4 293 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 SMTNL2Q2TAL5 461 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 KCNT1Q5JUK3 1230 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 ERMARDQ5T6L9 678 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 TXNRD3NBQ6F5E7 133 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 TMEM184AQ6ZMB5 413 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 C4orf50Q6ZRC1 276 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CLEC20AQ6ZU45 233 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 PAQR9Q6ZVX9 377 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 STRADAQ7RTN6 431 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CROCCP2Q86T23 111 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 FAM35AQ86V20 835 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 PSTKQ8IV42 348 aaKnown RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 DCP1BQ8IZD4 617 aaKnown RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 IQCKQ8N0W5 287 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 FAM169BQ8N8A8 192 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 TMEM102Q8N9M5 508 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 ZSCAN1Q8NBB4 408 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 UBLCP1Q8WVY7 318 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 GATAD2BQ8WXI9 593 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CENPIQ92674 756 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 NELL1Q92832 810 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 ACSF2Q96CM8 615 aaPredicted RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 PCED1BQ96HM7 432 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CFAP57Q96MR6 1250 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 FERD3LQ96RJ6 166 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 PAAF1Q9BRP4 392 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 HERPUD2Q9BSE4 406 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 TRIM62Q9BVG3 475 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 COLEC11Q9BWP8 271 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 FOXP3Q9BZS1 431 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 PRDM16Q9HAZ2 1276 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CNGB3Q9NQW8 809 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 ZDHHC18Q9NUE0 388 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 RRN3Q9NYV6 651 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 GRHL1Q9NZI5 618 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 CACNG4Q9UBN1 327 aa7.04□□□□□ -1.28
SLIRP-204ENST00000555890 FN1P02751 2386 aaKnown RBP7.04□□□□□ -1.28
SLIRP-204ENST00000555890 OTOGQ6ZRI0 2925 aa7.03□□□□□ -1.28
SLIRP-204ENST00000555890 A0A096LPE4 126 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms