RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 CCDC117Q8IWD4 279 aaPredicted RBP9.9□□□□□ -0.82
ACTN1-215ENST00000555616 TMEFF1Q8IYR6 380 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 CARNMT1Q8N4J0 409 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 UBL4BQ8N7F7 174 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 OR2T3Q8NH03 318 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 TCEAL3Q969E4 200 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 RNF34Q969K3 372 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 MYO19Q96H55 970 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 BTBD6Q96KE9 485 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 MRGPRX3Q96LB0 322 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 NAPGQ99747 312 aaPredicted RBP9.9□□□□□ -0.82
ACTN1-215ENST00000555616 RTKNQ9BST9 563 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 PRDM16Q9HAZ2 1276 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 RXFP3Q9NSD7 469 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 ARHGEF38Q9NXL2 777 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 COX16Q9P0S2 106 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 EVLQ9UI08 416 aaPredicted RBP9.9□□□□□ -0.82
ACTN1-215ENST00000555616 DNAI1Q9UI46 699 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 CYP8B1Q9UNU6 501 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.9□□□□□ -0.82
ACTN1-215ENST00000555616 ALG6Q9Y672 507 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 CKAP5Q14008 2032 aa9.9□□□□□ -0.82
ACTN1-215ENST00000555616 TNRC6BQ9UPQ9 1833 aaKnown RBP9.89□□□□□ -0.83
ACTN1-215ENST00000555616 LNP1A1A4G5 178 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 CCDC66A2RUB6 948 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 H0Y626 953 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 I6L893 689 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-215ENST00000555616 FTCDO95954 541 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 F9P00740 461 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 COMTP21964 271 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 CD6P30203 668 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 PCK1P35558 622 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 TPMTP51580 245 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 IRAK1P51617 712 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 ATXN1P54253 815 aaKnown RBP9.89□□□□□ -0.83
ACTN1-215ENST00000555616 OXCT1P55809 520 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 ATP11AP98196 1134 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 OGDHQ02218 1023 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 ZBTB16Q05516 673 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 DEUP1Q05D60 604 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF252P-AS1Q0IIN9 211 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 SLC12A1Q13621 1099 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 AUHQ13825 339 aaKnown RBP9.89□□□□□ -0.83
ACTN1-215ENST00000555616 RPS6KA1Q15418 735 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 HADHQ16836 314 aaKnown RBP9.89□□□□□ -0.83
ACTN1-215ENST00000555616 CDO1Q16878 200 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 HNRNPA1L2Q32P51 320 aaKnown RBP9.89□□□□□ -0.83
ACTN1-215ENST00000555616 CCDC14Q49A88 953 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 C5orf22Q49AR2 442 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 ACBD5Q5T8D3 534 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-215ENST00000555616 SYT10Q6XYQ8 523 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 SND1Q7KZF4 910 aaKnown RBP eCLIP9.89□□□□□ -0.83
ACTN1-215ENST00000555616 ARMCX6Q7L4S7 300 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 STRADAQ7RTN6 431 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 NT5DC3Q86UY8 548 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 CIR1Q86X95 450 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-215ENST00000555616 TMPRSS6Q8IU80 811 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 SYT12Q8IV01 421 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 RHOT1Q8IXI2 618 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF683Q8IZ20 524 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 KIF18AQ8NI77 898 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 FAM172AQ8WUF8 416 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF592Q92610 1267 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 PRCCQ92733 491 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-215ENST00000555616 IGSF8Q969P0 613 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 SIPA1Q96FS4 1042 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 CFAP57Q96MR6 1250 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 WDR24Q96S15 920 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 TBCBQ99426 244 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 EDEM2Q9BV94 578 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 GOLPH3Q9H4A6 298 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 PRSS16Q9NQE7 514 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 ANLNQ9NQW6 1124 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 ITM2CQ9NQX7 267 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 KIAA1522Q9P206 1035 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-215ENST00000555616 PILRBQ9UKJ0 227 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 HS3ST4Q9Y661 456 aa9.89□□□□□ -0.83
ACTN1-215ENST00000555616 ATXN2Q99700 1313 aaKnown RBP9.88□□□□□ -0.83
ACTN1-215ENST00000555616 PATE3B3GLJ2 98 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 KHNYNO15037 678 aaKnown RBP9.88□□□□□ -0.83
ACTN1-215ENST00000555616 PSTPIP1O43586 416 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 PRPSAP2O60256 369 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 LRCH4O75427 683 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 CLDN11O75508 207 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 SRPRAP08240 638 aaKnown RBP9.88□□□□□ -0.83
ACTN1-215ENST00000555616 KRT7P08729 469 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 ITPKAP23677 461 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 OXTRP30559 389 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 RDXP35241 583 aaKnown RBP9.88□□□□□ -0.83
ACTN1-215ENST00000555616 GGCXP38435 758 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 PLK1P53350 603 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 ST8SIA6P61647 398 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 ECT2LQ008S8 904 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 ZNF33AQ06730 810 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 C15orf59Q2T9L4 293 aaPredicted RBP9.88□□□□□ -0.83
ACTN1-215ENST00000555616 ODF2Q5BJF6 829 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 STPG1Q5TH74 334 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 MEI1Q5TIA1 1274 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 LRRC38Q5VT99 294 aa9.88□□□□□ -0.83
ACTN1-215ENST00000555616 POLNQ7Z5Q5 900 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms