RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 COBLL1Q53SF7 1204 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 HS1BP3Q53T59 392 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 ARHGAP40Q5TG30 622 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 ISM2Q6H9L7 571 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 FBXL22Q6P050 247 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 BEND5Q7L4P6 421 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 ZNF248Q8NDW4 579 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 OR4C6Q8NH72 309 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 RNF34Q969K3 372 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 CCDC34Q96HJ3 373 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 RPRD1AQ96P16 312 aaPredicted RBP13.48□□□□□ -0.25
XRCC3-212ENST00000555231 CALN1Q9BXU9 219 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 OSBPL2Q9H1P3 480 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 FAM204AQ9H8W3 233 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 SLC12A6Q9UHW9 1150 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 KALRNO60229 2985 aa13.48□□□□□ -0.25
XRCC3-212ENST00000555231 RNF103O00237 685 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 MCF2LO15068 1137 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 OPA1O60313 960 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 USP12O75317 370 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 LETM1O95202 739 aaPredicted RBP13.47□□□□□ -0.25
XRCC3-212ENST00000555231 CTSLP07711 333 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 GIMD1P0DJR0 217 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 PCBP4P57723 403 aaKnown RBP13.47□□□□□ -0.25
XRCC3-212ENST00000555231 CLDN2P57739 230 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 YWHAZP63104 245 aaKnown RBP13.47□□□□□ -0.25
XRCC3-212ENST00000555231 EIF4EBP2Q13542 120 aaPredicted RBP13.47□□□□□ -0.25
XRCC3-212ENST00000555231 ZNF542PQ5EBM4 170 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 RABGAP1LQ5R372 815 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 PIP5KL1Q5T9C9 394 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 CDCP2Q5VXM1 449 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 DEFB106AQ8N104 65 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 SH2D3CQ8N5H7 860 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 TMEM145Q8NBT3 493 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 EHBP1Q8NDI1 1231 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 OR13H1Q8NG92 308 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 ARRDC3Q96B67 414 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 APOLD1Q96LR9 279 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 NOX5Q96PH1 765 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 FEM1AQ9BSK4 669 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 SCAND2PQ9GZW5 306 aaPredicted RBP13.47□□□□□ -0.25
XRCC3-212ENST00000555231 ACP6Q9NPH0 428 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 ASH1LQ9NR48 2969 aaKnown RBP13.47□□□□□ -0.25
XRCC3-212ENST00000555231 KLHL11Q9NVR0 708 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 DDIT4Q9NX09 232 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 VPS28Q9UK41 221 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 VANGL2Q9ULK5 521 aa13.47□□□□□ -0.25
XRCC3-212ENST00000555231 MGAQ8IWI9 3026 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 TRPM6Q9BX84 2022 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 PYCARD-AS1I3L0S3 204 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 J3QKU1 62 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 KPNA3O00505 521 aaPredicted RBP13.46□□□□□ -0.25
XRCC3-212ENST00000555231 ALOX15BO15296 676 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 PMM2O15305 246 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 THAP12O43422 761 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 CSO75390 466 aaKnown RBP13.46□□□□□ -0.25
XRCC3-212ENST00000555231 GRAP2O75791 330 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 PIAS2O75928 621 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 MT-CO1P00395 513 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 SRCP12931 536 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
XRCC3-212ENST00000555231 OXCT1P55809 520 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 CDK17Q00537 523 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 GCNT1Q02742 428 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 CETN1Q12798 172 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 AUHQ13825 339 aaKnown RBP13.46□□□□□ -0.25
XRCC3-212ENST00000555231 TTC39BQ5VTQ0 682 aaPredicted RBP13.46□□□□□ -0.25
XRCC3-212ENST00000555231 BROXQ5VW32 411 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 C14orf80Q86SX3 495 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 TMEM110Q86TL2 294 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 FMR1NBQ8N0W7 255 aaPredicted RBP13.46□□□□□ -0.25
XRCC3-212ENST00000555231 SMARCE1Q969G3 411 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 ZNF578Q96N58 590 aaPredicted RBP13.46□□□□□ -0.25
XRCC3-212ENST00000555231 GSDMAQ96QA5 445 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 DEPDC7Q96QD5 511 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.46□□□□□ -0.25
XRCC3-212ENST00000555231 TRIM62Q9BVG3 475 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 SEMA4CQ9C0C4 833 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 THAP9Q9H5L6 903 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 PREBQ9HCU5 417 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 OR51B4Q9Y5P0 310 aa13.46□□□□□ -0.25
XRCC3-212ENST00000555231 CFAP46Q8IYW2 2715 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 COL27A1Q8IZC6 1860 aaPredicted RBP13.45□□□□□ -0.26
XRCC3-212ENST00000555231 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.45□□□□□ -0.26
XRCC3-212ENST00000555231 K7ERQ8 282 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 ERVH48-1M5A8F1 160 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 KLK10O43240 276 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 SNAP91O60641 907 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 NEBLO76041 1014 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 PCDH8O95206 1070 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 CKMT1AP12532 417 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 AKT2P31751 481 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 CCR1P32246 355 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 CHRNA3P32297 505 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 VASPP50552 380 aaPredicted RBP13.45□□□□□ -0.26
XRCC3-212ENST00000555231 TMPRSS3P57727 454 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 ZNF177Q13360 481 aaPredicted RBP13.45□□□□□ -0.26
XRCC3-212ENST00000555231 LY6DQ14210 128 aa13.45□□□□□ -0.26
XRCC3-212ENST00000555231 ZNF284Q2VY69 593 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms