RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 PAAF1Q9BRP4 392 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 MRPL9Q9BYD2 267 aaKnown RBP13.62□□□□□ -0.23
SIX1-203ENST00000554986 FRMD8Q9BZ67 464 aaPredicted RBP13.62□□□□□ -0.23
SIX1-203ENST00000554986 BARX2Q9UMQ3 279 aaPredicted RBP13.62□□□□□ -0.23
SIX1-203ENST00000554986 USTQ9Y2C2 406 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 PCDHA11Q9Y5I1 949 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 TEX264Q9Y6I9 313 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 TMEM63AO94886 807 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 IGFBP6P24592 240 aaPredicted RBP13.62□□□□□ -0.23
SIX1-203ENST00000554986 SERPINB6P35237 376 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 RPL22P35268 128 aaKnown RBP13.62□□□□□ -0.23
SIX1-203ENST00000554986 HDAC4P56524 1084 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 MRPS5P82675 430 aaKnown RBP13.62□□□□□ -0.23
SIX1-203ENST00000554986 MYBPC1Q00872 1141 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 GAD2Q05329 585 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 UBAP2LQ14157 1087 aaKnown RBP13.62□□□□□ -0.23
SIX1-203ENST00000554986 RARS2Q5T160 578 aaKnown RBP13.62□□□□□ -0.23
SIX1-203ENST00000554986 CES4AQ5XG92 561 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 ZFP1Q6P2D0 407 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 SV2AQ7L0J3 742 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 COLGALT2Q8IYK4 626 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 NIPA2Q8N8Q9 360 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 GCNAQ96QF7 691 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 CGRRF1Q99675 332 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 C11orf70Q9BRQ4 267 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 GRIP2Q9C0E4 1043 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 PLGRKTQ9HBL7 147 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 TMEM165Q9HC07 324 aa13.62□□□□□ -0.23
SIX1-203ENST00000554986 A0A1W2PPC1 479 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 LINC01553A4QN01 128 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 CCDC160A6NGH7 325 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 CAPN8A6NHC0 703 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 CASTOR2A6NHX0 329 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 MEI4A8MW99 385 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 TRIM49D1C9J1S8 452 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 TRDMT1O14717 391 aaKnown RBP13.61□□□□□ -0.23
SIX1-203ENST00000554986 CRTAMO95727 393 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 FAM58BPP0C7Q3 252 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 PCSK6P29122 969 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 CRHR1P34998 444 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 GJC1P36383 396 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 CDK9P50750 372 aaKnown RBP13.61□□□□□ -0.23
SIX1-203ENST00000554986 TFAMQ00059 246 aaKnown RBP13.61□□□□□ -0.23
SIX1-203ENST00000554986 TAP1Q03518 808 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 STX3Q13277 289 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 MPP3Q13368 585 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 TUSC3Q13454 348 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 CNGA3Q16281 694 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 TAZQ16635 292 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 ATP13A4Q4VNC1 1196 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 PACS1Q6VY07 963 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 C15orf39Q6ZRI6 1047 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 TRIM67Q6ZTA4 783 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 NCCRP1Q6ZVX7 275 aaPredicted RBP13.61□□□□□ -0.23
SIX1-203ENST00000554986 FIBCD1Q8N539 461 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 VPS50Q96JG6 964 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 HAUS8Q9BT25 410 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 MRPL1Q9BYD6 325 aaKnown RBP13.61□□□□□ -0.23
SIX1-203ENST00000554986 SLC2A11Q9BYW1 496 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 MTMR12Q9C0I1 747 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 SMYD3Q9H7B4 428 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 XPO7Q9UIA9 1087 aaKnown RBP13.61□□□□□ -0.23
SIX1-203ENST00000554986 CNOT11Q9UKZ1 510 aaKnown RBP13.61□□□□□ -0.23
SIX1-203ENST00000554986 DERAQ9Y315 318 aa13.61□□□□□ -0.23
SIX1-203ENST00000554986 F8W810 466 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 H0YJX3 145 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 RFPL1O75677 317 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 WEE2P0C1S8 567 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 ALOX15P16050 662 aaPredicted RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 TNNI1P19237 187 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 PRKCHP24723 683 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 ELK3P41970 407 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 ERFP50548 548 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 CLDN10P78369 228 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 SURF1Q15526 300 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 LRIT3Q3SXY7 679 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 PDCD4Q53EL6 469 aaKnown RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 RALGPS1Q5JS13 557 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 BBS12Q6ZW61 710 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 PATL1Q86TB9 770 aaKnown RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 WDR49Q8IV35 697 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 PIWIL2Q8TC59 973 aaKnown RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 NKX2-4Q9H2Z4 354 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 XAB2Q9HCS7 855 aaKnown RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 DNAJC28Q9NX36 388 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 RSL24D1Q9UHA3 163 aaKnown RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 UBQLN1Q9UMX0 589 aaKnown RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 CNTN6Q9UQ52 1028 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 APOBEC2Q9Y235 224 aaKnown RBP13.6□□□□□ -0.23
SIX1-203ENST00000554986 AP4B1Q9Y6B7 739 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 SCN1AP35498 2009 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 CDH23Q9H251 3354 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 NT5C1B-RDH14C9J2C7 533 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 PPEF2O14830 753 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 SRGAP2BP0DMP2 458 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 ZNF23P17027 643 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 ITGAXP20702 1163 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 DNAJB2P25686 324 aa13.6□□□□□ -0.23
SIX1-203ENST00000554986 ALDH3B2P48448 385 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms