RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 FARP1Q9Y4F1 1045 aaPredicted RBP24.89■■□□□ 1.58
FOXA1-204ENST00000554607 PTPRQQ9UMZ3 2332 aa24.89■■□□□ 1.57
FOXA1-204ENST00000554607 TEX51A0A1B0GUA7 166 aa24.88■■□□□ 1.57
FOXA1-204ENST00000554607 SDC3O75056 442 aa24.88■■□□□ 1.57
FOXA1-204ENST00000554607 GNA14O95837 355 aa24.88■■□□□ 1.57
FOXA1-204ENST00000554607 DAB2P98082 770 aa24.88■■□□□ 1.57
FOXA1-204ENST00000554607 TBC1D25Q3MII6 688 aa24.88■■□□□ 1.57
FOXA1-204ENST00000554607 NEK5Q6P3R8 708 aa24.88■■□□□ 1.57
FOXA1-204ENST00000554607 UBE2TQ9NPD8 197 aaPredicted RBP24.88■■□□□ 1.57
FOXA1-204ENST00000554607 KLHL11Q9NVR0 708 aa24.88■■□□□ 1.57
FOXA1-204ENST00000554607 DDIT4Q9NX09 232 aa24.88■■□□□ 1.57
FOXA1-204ENST00000554607 BICDL2A1A5D9 508 aa24.87■■□□□ 1.57
FOXA1-204ENST00000554607 TRIM38O00635 465 aa24.87■■□□□ 1.57
FOXA1-204ENST00000554607 THAP12O43422 761 aa24.87■■□□□ 1.57
FOXA1-204ENST00000554607 MT-CO3P00414 261 aa24.87■■□□□ 1.57
FOXA1-204ENST00000554607 PITX1P78337 314 aaPredicted RBP24.87■■□□□ 1.57
FOXA1-204ENST00000554607 EFHC1Q5JVL4 640 aa24.87■■□□□ 1.57
FOXA1-204ENST00000554607 TTI2Q6NXR4 508 aa24.87■■□□□ 1.57
FOXA1-204ENST00000554607 ENOSF1Q7L5Y1 443 aa24.87■■□□□ 1.57
FOXA1-204ENST00000554607 SLC25A45Q8N413 288 aa24.87■■□□□ 1.57
FOXA1-204ENST00000554607 INTS2Q9H0H0 1204 aaKnown RBP24.87■■□□□ 1.57
FOXA1-204ENST00000554607 ASNSD1Q9NWL6 643 aa24.87■■□□□ 1.57
FOXA1-204ENST00000554607 VPS28Q9UK41 221 aa24.87■■□□□ 1.57
FOXA1-204ENST00000554607 SYNJ2BP-COX16A0A087WUM0 186 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 CLDN11O75508 207 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 AFPP02771 609 aaKnown RBP24.86■■□□□ 1.57
FOXA1-204ENST00000554607 THEGLP0DJG4 465 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 CD44P16070 742 aaKnown RBP24.86■■□□□ 1.57
FOXA1-204ENST00000554607 DGKAP23743 735 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 GNA15P30679 374 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 PDCLQ13371 301 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 AUHQ13825 339 aaKnown RBP24.86■■□□□ 1.57
FOXA1-204ENST00000554607 TAF5Q15542 800 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 POM121L1PQ3SYA9 428 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 ISM2Q6H9L7 571 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 KLHL10Q6JEL2 608 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 Q6ZVU0 165 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 TRIM59Q8IWR1 403 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 DEFB106AQ8N104 65 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 SH2D3CQ8N5H7 860 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 TMEM145Q8NBT3 493 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 OR4C6Q8NH72 309 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 CCDC114Q96M63 670 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 SLC2A13Q96QE2 648 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 COX16Q9P0S2 106 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.86■■□□□ 1.57
FOXA1-204ENST00000554607 KALRNO60229 2985 aa24.86■■□□□ 1.57
FOXA1-204ENST00000554607 HSF2BPO75031 334 aa24.85■■□□□ 1.57
FOXA1-204ENST00000554607 C1QL1O75973 258 aa24.85■■□□□ 1.57
FOXA1-204ENST00000554607 CCDC173Q0VFZ6 552 aa24.85■■□□□ 1.57
FOXA1-204ENST00000554607 KCNMA1Q12791 1236 aa24.85■■□□□ 1.57
FOXA1-204ENST00000554607 KDM7AQ6ZMT4 941 aa24.85■■□□□ 1.57
FOXA1-204ENST00000554607 NELFBQ8WX92 580 aa24.85■■□□□ 1.57
FOXA1-204ENST00000554607 FAM81BQ96LP2 452 aa24.85■■□□□ 1.57
FOXA1-204ENST00000554607 VANGL2Q9ULK5 521 aa24.85■■□□□ 1.57
FOXA1-204ENST00000554607 CA5BQ9Y2D0 317 aa24.85■■□□□ 1.57
FOXA1-204ENST00000554607 OR51B4Q9Y5P0 310 aa24.85■■□□□ 1.57
FOXA1-204ENST00000554607 SLC31A1O15431 190 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 BNIP3LO60238 219 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 ALPPL2P10696 532 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 TAS2R38P59533 333 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 KRT83P78385 493 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 CENPCQ03188 943 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 TLE3Q04726 772 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 ERICH1Q86X53 443 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 ELOA2Q8IYF1 753 aaPredicted RBP24.84■■□□□ 1.57
FOXA1-204ENST00000554607 LSMEM2Q8N112 164 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 ZNF578Q96N58 590 aaPredicted RBP24.84■■□□□ 1.57
FOXA1-204ENST00000554607 DYRK4Q9NR20 520 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 MAN1B1Q9UKM7 699 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 HS3ST2Q9Y278 367 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 TBC1D30Q9Y2I9 924 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 DOCK9Q9BZ29 2069 aa24.84■■□□□ 1.57
FOXA1-204ENST00000554607 A0A1W2PQU0 124 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 CAPN8A6NHC0 703 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 AKT2P31751 481 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 CDH4P55283 916 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 MARSP56192 900 aaKnown RBP24.83■■□□□ 1.57
FOXA1-204ENST00000554607 PIP5KL1Q5T9C9 394 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 HORMAD1Q86X24 394 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 SPACA3Q8IXA5 215 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 ZNF248Q8NDW4 579 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 TMIEQ8NEW7 156 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 OR52K2Q8NGK3 314 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 FAM174AQ8TBP5 190 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 PPP1R13BQ96KQ4 1090 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 LGMNQ99538 433 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 MUC3BQ9H195 1237 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 EVA1BQ9NVM1 165 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 HS3ST4Q9Y661 456 aa24.83■■□□□ 1.57
FOXA1-204ENST00000554607 ZIC2O95409 532 aaPredicted RBP24.82■■□□□ 1.56
FOXA1-204ENST00000554607 CKMT1AP12532 417 aa24.82■■□□□ 1.56
FOXA1-204ENST00000554607 HNRNPA2B1P22626 353 aaKnown RBP24.82■■□□□ 1.56
FOXA1-204ENST00000554607 CHRNA3P32297 505 aa24.82■■□□□ 1.56
FOXA1-204ENST00000554607 SNX16P57768 344 aa24.82■■□□□ 1.56
FOXA1-204ENST00000554607 CXADRP78310 365 aa24.82■■□□□ 1.56
FOXA1-204ENST00000554607 C5orf22Q49AR2 442 aa24.82■■□□□ 1.56
FOXA1-204ENST00000554607 ZNF605Q86T29 641 aa24.82■■□□□ 1.56
FOXA1-204ENST00000554607 ATP11CQ8NB49 1132 aa24.82■■□□□ 1.56
FOXA1-204ENST00000554607 IFT43Q96FT9 208 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms