RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 IFT22Q9H7X7 185 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 TMEM206Q9H813 350 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 DMRT3Q9NQL9 472 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 KCNH7Q9NS40 1196 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 IARS2Q9NSE4 1012 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SNTG1Q9NSN8 517 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ADPRHL2Q9NX46 363 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 DLL3Q9NYJ7 618 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SEC63Q9UGP8 760 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 MBD1Q9UIS9 605 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SALL4Q9UJQ4 1053 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 FBXO4Q9UKT5 387 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 TTC7AQ9ULT0 858 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ST3GAL5Q9UNP4 418 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 DOLKQ9UPQ8 538 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ATP23Q9Y6H3 246 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CAPN7Q9Y6W3 813 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 NOTCH4Q99466 2003 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 C15orf38-AP3S2A0A0A6YYH1 394 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GOLGA6L7A0A1B0GV03 622 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 hCG_1809904A0A1W2PP81 198 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 A0A1W2PPE2 198 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 A0A1W2PR64 198 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GSAPA4D1B5 854 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SPDYE3A6NKU9 549 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GOLGA8AA7E2F4 631 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PRR5-ARHGAP8B1AHC4 643 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GPR89AB7ZAQ6 455 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 UBE2CO00762 179 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ABLIM1O14639 778 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GREM1O60565 184 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 LRRN2O75325 713 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PTP4A3O75365 173 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 RPS6KA5O75582 802 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 BEST1O76090 585 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SLITRK3O94933 977 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SCAF4O95104 1147 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 KLHL2O95198 593 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PLGP00747 810 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 OPN1MWP04001 364 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 URODP06132 367 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GPR89BP0CG08 455 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PRR35P0CG20 571 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 OPN1MW2P0DN77 364 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 OPN1MW3P0DN78 364 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 DLATP10515 647 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 DARSP14868 501 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 HLA-DPA1P20036 260 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 KLRC1P26715 233 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 HOXA9P31269 272 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SFNP31947 248 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 MC4RP32245 332 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 LONP1P36776 959 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 TECP42680 631 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CLNS1AP54105 237 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SLC8A3P57103 927 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 STARD6P59095 220 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 KRT17Q04695 432 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 RNASELQ05823 741 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PMS2P11Q13670 270 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PTK2BQ14289 1009 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 STARD3Q14849 445 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 INAVAQ3KP66 663 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ODF2Q5BJF6 829 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 XKR9Q5GH70 373 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CLLU1OSQ5K130 101 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 KLHDC10Q6PID8 442 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 LSRQ86X29 649 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 WDR49Q8IV35 697 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PHC2Q8IXK0 858 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 LRRC34Q8IZ02 419 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PPM1KQ8N3J5 372 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SFRP1Q8N474 314 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF511Q8NB15 262 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GIMAP7Q8NHV1 300 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 HUS1BQ8NHY5 278 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GRK7Q8WTQ7 553 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GLG1Q92896 1179 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 KISS1RQ969F8 398 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 BTBD6Q96KE9 485 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 GDAP1L1Q96MZ0 367 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 RIT2Q99578 217 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CDC6Q99741 560 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 TSG101Q99816 390 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 PAIP1Q9H074 479 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ZMYND12Q9H0C1 365 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ISCUQ9H1K1 167 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 POMKQ9H5K3 350 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 SARS2Q9NP81 518 aaKnown RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 NPHS2Q9NP85 383 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 ZNF302Q9NR11 478 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 CYP26B1Q9NR63 512 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 DECR2Q9NUI1 292 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 BARHL2Q9NY43 387 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 EHD3Q9NZN3 535 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 EHD2Q9NZN4 543 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 C5AR2Q9P296 337 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 AMACRQ9UHK6 382 aa2.79□□□□□ -1.96
PRPF39-206ENST00000554429 FOXD3Q9UJU5 478 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-206ENST00000554429 L1RE1Q9UN81 338 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms