RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ARTNQ5T4W7 220 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 SH3PXD2AQ5TCZ1 1133 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 PLEKHA7Q6IQ23 1121 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 SLC23A3Q6PIS1 610 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 VPS36Q86VN1 386 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 C17orf53Q8N3J3 647 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-211ENST00000554310 DEFB119Q8N690 84 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 CCDC112Q8NEF3 446 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 TRIM11Q96F44 468 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 GPR174Q9BXC1 333 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 NUSAP1Q9BXS6 441 aaKnown RBP13.4□□□□□ -0.26
SHMT2-211ENST00000554310 RAB6CQ9H0N0 254 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 SGK2Q9HBY8 427 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 RXFP3Q9NSD7 469 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 TMEM74BQ9NUR3 256 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 ZNF212Q9UDV6 495 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 OR12D3Q9UGF7 316 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 HS3ST2Q9Y278 367 aa13.4□□□□□ -0.26
SHMT2-211ENST00000554310 BZW2Q9Y6E2 419 aaKnown RBP13.4□□□□□ -0.26
SHMT2-211ENST00000554310 ILVBLA1L0T0 632 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 TMCO5BA8MYB1 307 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 DDX3XO00571 662 aaKnown RBP eCLIP13.39□□□□□ -0.271e-14■■□□□ 13.5
SHMT2-211ENST00000554310 ALOX15BO15296 676 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 ATP9BO43861 1147 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 ADH1BP00325 375 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 SERPINF2P08697 491 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 MYBL1P10243 752 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 ETFBP38117 255 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 MAPKAPK2P49137 400 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 CLCN6P51797 869 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 MAMLD1Q13495 774 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 STPG1Q5TH74 334 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 IL31Q6EBC2 164 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 SLFN11Q7Z7L1 901 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 DSG4Q86SJ6 1040 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 FAM124AQ86V42 546 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 SH2D3CQ8N5H7 860 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 CCDC185Q8N715 623 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 FRS2Q8WU20 508 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 DNASE2BQ8WZ79 361 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 PTPRN2Q92932 1015 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 TBC1D31Q96DN5 1066 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 BTBD1Q9H0C5 482 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 VPS51Q9UID3 782 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 FZD4Q9ULV1 537 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 CAPN11Q9UMQ6 739 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 SLC6A14Q9UN76 642 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 NEU3Q9UQ49 428 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 NCKAP1Q9Y2A7 1128 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 SCINQ9Y6U3 715 aa13.39□□□□□ -0.27
SHMT2-211ENST00000554310 A0A0D9SEW6 157 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 CXorf51AA0A1B0GTR3 108 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 METTL12A8MUP2 240 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-211ENST00000554310 RTN2O75298 545 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 LRIG2O94898 1065 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 SEMA4FO95754 770 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 GYPCP04921 128 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 CFIP05156 583 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 PLEKP08567 350 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-211ENST00000554310 GNSP15586 552 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 RHOQP17081 205 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 PSMD8P48556 350 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 NUMBP49757 651 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 IRX4P78413 519 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 GNA12Q03113 381 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 DCAF12L1Q5VU92 463 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 HGSNATQ68CP4 663 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 SPECC1LQ69YQ0 1117 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 RWDD4Q6NW29 188 aaKnown RBP13.38□□□□□ -0.27
SHMT2-211ENST00000554310 MMAAQ8IVH4 418 aaKnown RBP13.38□□□□□ -0.27
SHMT2-211ENST00000554310 RGL4Q8IZJ4 473 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 FNIP1Q8TF40 1166 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 OR8D1Q8WZ84 308 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 CCDC114Q96M63 670 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 PSMB7Q99436 277 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 CAPN10Q9HC96 672 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 TMEM9BQ9NQ34 198 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 TMEM248Q9NWD8 314 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 FBXL12Q9NXK8 326 aa13.38□□□□□ -0.27
SHMT2-211ENST00000554310 LUC7L2Q9Y383 392 aaKnown RBP13.38□□□□□ -0.27
SHMT2-211ENST00000554310 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.38□□□□□ -0.27
SHMT2-211ENST00000554310 EIF3CLB5ME19 914 aaKnown RBP13.37□□□□□ -0.27
SHMT2-211ENST00000554310 MID1O15344 667 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 SNAP91O60641 907 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 FTLP02792 175 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-211ENST00000554310 SERPING1P05155 500 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 SRCP12931 536 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 VAV1P15498 845 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 ENGP17813 658 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 C5AR1P21730 350 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 PSMA2P25787 234 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 L1CAMP32004 1257 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 SLC8A1P32418 973 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 ACSL1P33121 698 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 OGDHQ02218 1023 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 GFPT1Q06210 699 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-211ENST00000554310 DLG2Q15700 870 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 ACCSLQ4AC99 568 aa13.37□□□□□ -0.27
SHMT2-211ENST00000554310 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms