RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 CHD5Q8TDI0 1954 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 PRR5-ARHGAP8B1AHC4 643 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 RNASEH1O60930 286 aaKnown RBP20.86■□□□□ 0.93
FOXA1-203ENST00000553751 ZMPSTE24O75844 475 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 GLDCP23378 1020 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 ARHGAP8P85298 464 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 ELAVL3Q14576 367 aaKnown RBP20.86■□□□□ 0.93
FOXA1-203ENST00000553751 DLG2Q15700 870 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 CST6Q15828 149 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 TTC31Q49AM3 519 aaPredicted RBP20.86■□□□□ 0.93
FOXA1-203ENST00000553751 CYP4V2Q6ZWL3 525 aaPredicted RBP20.86■□□□□ 0.93
FOXA1-203ENST00000553751 SYT12Q8IV01 421 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 RMDN1Q96DB5 314 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 GPR174Q9BXC1 333 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 ATP13A1Q9HD20 1204 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 GPATCH2LQ9NWQ4 482 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 PILRBQ9UKJ0 227 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 DCHS1Q96JQ0 3298 aa20.86■□□□□ 0.93
FOXA1-203ENST00000553751 PATE3B3GLJ2 98 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 K7ERQ8 282 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 CBX4O00257 560 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 GDF9O60383 454 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 LRCH4O75427 683 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 CYP1A2P05177 515 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 EPHB2P29323 1055 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 DPP6P42658 865 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 GFPT1Q06210 699 aaPredicted RBP20.85■□□□□ 0.93
FOXA1-203ENST00000553751 MAPK8IP2Q13387 824 aaPredicted RBP20.85■□□□□ 0.93
FOXA1-203ENST00000553751 NUMA1Q14980 2115 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 ASTE1Q2TB18 679 aaPredicted RBP20.85■□□□□ 0.93
FOXA1-203ENST00000553751 ACCSLQ4AC99 568 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 CCDC122Q5T0U0 273 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 LINGO4Q6UY18 593 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 Q6ZVU0 165 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 MMAAQ8IVH4 418 aaKnown RBP20.85■□□□□ 0.93
FOXA1-203ENST00000553751 C12orf50Q8NA57 414 aaPredicted RBP20.85■□□□□ 0.93
FOXA1-203ENST00000553751 ARHGEF26Q96DR7 871 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 EPAS1Q99814 870 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 SPON2Q9BUD6 331 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 SNRNP25Q9BV90 132 aaKnown RBP20.85■□□□□ 0.93
FOXA1-203ENST00000553751 RBSNQ9H1K0 784 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 RXFP3Q9NSD7 469 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 PCSK1NQ9UHG2 260 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 DNAI1Q9UI46 699 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 SCML1Q9UN30 329 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 AP4E1Q9UPM8 1137 aa20.85■□□□□ 0.93
FOXA1-203ENST00000553751 MID1O15344 667 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 CREB3O43889 395 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 RNF8O76064 485 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 TPM1P09493 284 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 MIPP30301 263 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 ACSL1P33121 698 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 HOXD12P35452 270 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 ACVRL1P37023 503 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 PSMD8P48556 350 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 CLCN6P51797 869 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 ADKP55263 362 aaKnown RBP20.84■□□□□ 0.93
FOXA1-203ENST00000553751 ARF5P84085 180 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 TBX2Q13207 712 aaPredicted RBP20.84■□□□□ 0.93
FOXA1-203ENST00000553751 SLC18A3Q16572 532 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 CA9Q16790 459 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 RSPO4Q2I0M5 234 aaPredicted RBP20.84■□□□□ 0.93
FOXA1-203ENST00000553751 AASDHQ4L235 1098 aaPredicted RBP20.84■□□□□ 0.93
FOXA1-203ENST00000553751 USP30Q70CQ3 517 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 RTL3Q8N8U3 475 aaKnown RBP20.84■□□□□ 0.93
FOXA1-203ENST00000553751 ATP11CQ8NB49 1132 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 CADM4Q8NFZ8 388 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 FOXJ1Q92949 421 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 ACE2Q9BYF1 805 aaPredicted RBP20.84■□□□□ 0.93
FOXA1-203ENST00000553751 TRIM5Q9C035 493 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 SERGEFQ9UGK8 458 aa20.84■□□□□ 0.93
FOXA1-203ENST00000553751 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.83■□□□□ 0.93
FOXA1-203ENST00000553751 SSU72P8A0A1W2PR75 194 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 SMAD6O43541 496 aaKnown RBP20.83■□□□□ 0.93
FOXA1-203ENST00000553751 ADH1BP00325 375 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 ETFBP38117 255 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 ID4P47928 161 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 GALCP54803 685 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 ERMARDQ5T6L9 678 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 DAB2IPQ5VWQ8 1189 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 C22orf39Q6P5X5 142 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 NETO1Q8TDF5 533 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 ARHGEF2Q92974 986 aaKnown RBP20.83■□□□□ 0.93
FOXA1-203ENST00000553751 NUP85Q9BW27 656 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 BTBD1Q9H0C5 482 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 MAGEH1Q9H213 219 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 NOL6Q9H6R4 1146 aaKnown RBP20.83■□□□□ 0.93
FOXA1-203ENST00000553751 ZNHIT6Q9NWK9 470 aaKnown RBP20.83■□□□□ 0.93
FOXA1-203ENST00000553751 DLL3Q9NYJ7 618 aa20.83■□□□□ 0.93
FOXA1-203ENST00000553751 EVLQ9UI08 416 aaPredicted RBP20.83■□□□□ 0.93
FOXA1-203ENST00000553751 CXorf51AA0A1B0GTR3 108 aa20.82■□□□□ 0.92
FOXA1-203ENST00000553751 LNP1A1A4G5 178 aa20.82■□□□□ 0.92
FOXA1-203ENST00000553751 MEI4A8MW99 385 aa20.82■□□□□ 0.92
FOXA1-203ENST00000553751 WASH4PA8MWX3 477 aa20.82■□□□□ 0.92
FOXA1-203ENST00000553751 EIF3CLB5ME19 914 aaKnown RBP20.82■□□□□ 0.92
FOXA1-203ENST00000553751 KHNYNO15037 678 aaKnown RBP20.82■□□□□ 0.92
FOXA1-203ENST00000553751 ALOX15BO15296 676 aa20.82■□□□□ 0.92
FOXA1-203ENST00000553751 FGF10O15520 208 aaPredicted RBP20.82■□□□□ 0.92
FOXA1-203ENST00000553751 PRPSAP2O60256 369 aa20.82■□□□□ 0.92
FOXA1-203ENST00000553751 RAMP2O60895 175 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms