RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 G3V2L1 256 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 FZD9O00144 591 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 XPO1O14980 1071 aaKnown RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 DCLK1O15075 740 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 PSMD3O43242 534 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 ITM2AO43736 263 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 CREB3O43889 395 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 MFSD11O43934 449 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 TSPAN1O60635 241 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 TRIM13O60858 407 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 LYPLA1O75608 230 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 BCAS2O75934 225 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 TMCC1O94876 653 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 DKK1O94907 266 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 ARIH2O95376 493 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 HSPA4LO95757 839 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 BAG2O95816 211 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 C8BP07358 591 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 UBTFL6P0CB48 400 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 HOXD8P13378 290 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 RAG1P15918 1043 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 DPEP1P16444 411 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 TYK2P29597 1187 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 ARRB2P32121 409 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 PNPLA4P41247 253 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 NPY2RP49146 381 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 KPNA2P52292 529 aaKnown RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 AQP4P55087 323 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 POLE2P56282 527 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 GJA9P57773 515 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SLC25A3Q00325 362 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 CDC42EP1Q00587 391 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 NSUN2Q08J23 767 aaKnown RBP eCLIP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SLC10A2Q12908 348 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 PRKAA1Q13131 559 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SEMA3BQ13214 749 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 BIRC2Q13490 618 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 MTM1Q13496 603 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 APOFQ13790 326 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 TRIP10Q15642 601 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 ZBTB6Q15916 424 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 UGP2Q16851 508 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 CDO1Q16878 200 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SPATS1Q496A3 300 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SFT2D3Q587I9 215 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 CFAP157Q5JU67 520 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 PPP1R26Q5T8A7 1209 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 ITPRIPL1Q6GPH6 555 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 EFCAB12Q6NXP0 572 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SCYL2Q6P3W7 929 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 ZCCHC23Q6ZST2 131 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 FRMD7Q6ZUT3 714 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 DENND5BQ6ZUT9 1274 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 PDZD4Q76G19 769 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SPATA24Q86W54 205 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 EGFL6Q8IUX8 553 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 C10orf107Q8IVU9 208 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 CNTN4Q8IWV2 1026 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 TMEM192Q8IY95 271 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 DEFB107AQ8IZN7 70 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 TAB3Q8N5C8 712 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 KYQ8NBH2 561 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 GOLM1Q8NBJ4 401 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 COLGALT1Q8NBJ5 622 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SHCBP1Q8NEM2 672 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 UBA3Q8TBC4 463 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SLC26A7Q8TE54 656 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 RNF139Q8WU17 664 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 KCTD13Q8WZ19 329 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 HDAC11Q96DB2 347 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 PGAP3Q96FM1 320 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 DCUN1D1Q96GG9 259 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 MAELQ96JY0 434 aaKnown RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 FAR2Q96K12 515 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SNX27Q96L92 541 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 ZNF560Q96MR9 790 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 KCTD15Q96SI1 283 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 NDNQ99608 321 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 GPR22Q99680 433 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 APOL6Q9BWW8 343 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 ILKAPQ9H0C8 392 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 GBA3Q9H227 469 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 DHX35Q9H5Z1 703 aaKnown RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 MINDY3Q9H8M7 445 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 ZNF395Q9H8N7 513 aaPredicted RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 TIMMDC1Q9NPL8 285 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 TCF7L2Q9NQB0 619 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 C8orf4Q9NR00 106 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 GPATCH2LQ9NWQ4 482 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 GDAP2Q9NXN4 497 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 RRN3Q9NYV6 651 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 GGA3Q9NZ52 723 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 TMEM216Q9P0N5 145 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 HCSTQ9UBK5 93 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SUCOQ9UBS9 1254 aaKnown RBP5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 ADAMTS6Q9UKP5 1117 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 SARDHQ9UL12 918 aa5.36□□□□□ -1.55
TMEM55B-204ENST00000553602 FZD10Q9ULW2 581 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms