RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 HPCAL4Q9UM19 191 aa15.72■□□□□ 0.11
SHMT2-204ENST00000553324 ABCA7Q8IZY2 2146 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 A0A0D9SEW6 157 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 METTL12A8MUP2 240 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 ALOX15BO15296 676 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 C5AR1P21730 350 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 SLC8A1P32418 973 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 GEMIN4P57678 1058 aaKnown RBP15.71■□□□□ 0.11
SHMT2-204ENST00000553324 TRIM61Q5EBN2 209 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 ARTNQ5T4W7 220 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 PSTKQ8IV42 348 aaKnown RBP15.71■□□□□ 0.11
SHMT2-204ENST00000553324 MMAAQ8IVH4 418 aaKnown RBP15.71■□□□□ 0.11
SHMT2-204ENST00000553324 SLC41A1Q8IVJ1 513 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 DNASE2BQ8WZ79 361 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 OR8D1Q8WZ84 308 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 PSMB7Q99436 277 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 OMDQ99983 421 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 MAGEH1Q9H213 219 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 PABPC3Q9H361 631 aaKnown RBP15.71■□□□□ 0.11
SHMT2-204ENST00000553324 MTG2Q9H4K7 406 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 CATSPERBQ9H7T0 1116 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 CD93Q9NPY3 652 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 TMEM74BQ9NUR3 256 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 FBXL12Q9NXK8 326 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 ZNF212Q9UDV6 495 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 VPS51Q9UID3 782 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 SLC6A14Q9UN76 642 aa15.71■□□□□ 0.11
SHMT2-204ENST00000553324 SPAG17Q6Q759 2223 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 EML5Q05BV3 1969 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 MEI4A8MW99 385 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 FAM72CH0Y354 149 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 CBX4O00257 560 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 SLC30A4O14863 429 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 MCF2LO15068 1137 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 IL1BP01584 269 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 SERPINF2P08697 491 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 EPHB2P29323 1055 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 ZNF135P52742 658 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-204ENST00000553324 CCDC15Q0P6D6 951 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 ERMARDQ5T6L9 678 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 FAM72AQ5TYM5 149 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 IL31Q6EBC2 164 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 FAM72DQ6L9T8 149 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 ALKBH5Q6P6C2 394 aaKnown RBP15.7■□□□□ 0.1
SHMT2-204ENST00000553324 ERMP1Q7Z2K6 904 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 FAM124AQ86V42 546 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 NLRP14Q86W24 1093 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 FAM72BQ86X60 149 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 CACUL1Q86Y37 369 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 STK40Q8N2I9 435 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 ACE2Q9BYF1 805 aaPredicted RBP15.7■□□□□ 0.1
SHMT2-204ENST00000553324 CEP44Q9C0F1 390 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 ATP13A1Q9HD20 1204 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 MYO1AQ9UBC5 1043 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 FZD4Q9ULV1 537 aa15.7■□□□□ 0.1
SHMT2-204ENST00000553324 TPX2Q9ULW0 747 aaKnown RBP15.7■□□□□ 0.1
SHMT2-204ENST00000553324 DMXL1Q9Y485 3027 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 C1QTNF3-AMACRE9PGA6 284 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 MID1O15344 667 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 FGF10O15520 208 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-204ENST00000553324 ATMINO43313 823 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-204ENST00000553324 CREB3O43889 395 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 PRPSAP2O60256 369 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 GDF9O60383 454 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 SNAP91O60641 907 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 RAMP2O60895 175 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 SEMA4FO95754 770 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 SYPP08247 313 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 SRCP12931 536 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 GOT1P17174 413 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 ACSL1P33121 698 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 PCK1P35558 622 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 RECQLP46063 649 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-204ENST00000553324 NUMBP49757 651 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 IRX4P78413 519 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 FOXK2Q01167 660 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 OGDHQ02218 1023 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 GFPT1Q06210 699 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-204ENST00000553324 PIGHQ14442 188 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-204ENST00000553324 POLD3Q15054 466 aaPredicted RBP15.69■□□□□ 0.1
SHMT2-204ENST00000553324 CCDC122Q5T0U0 273 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 STPG1Q5TH74 334 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 DCAF12L1Q5VU92 463 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 VSTM4Q8IW00 320 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 OR7D4Q8NG98 312 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 DNAJC7Q99615 494 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 SMOC1Q9H4F8 434 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 ARHGAP20Q9P2F6 1191 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 DNAI1Q9UI46 699 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 PPM1HQ9ULR3 514 aa15.69■□□□□ 0.1
SHMT2-204ENST00000553324 A0A087X0T9 212 aa15.68■□□□□ 0.1
SHMT2-204ENST00000553324 SSU72P8A0A1W2PR75 194 aa15.68■□□□□ 0.1
SHMT2-204ENST00000553324 LNP1A1A4G5 178 aa15.68■□□□□ 0.1
SHMT2-204ENST00000553324 ZSCAN5CA6NGD5 496 aaPredicted RBP15.68■□□□□ 0.1
SHMT2-204ENST00000553324 LRRC72A6NJI9 287 aa15.68■□□□□ 0.1
SHMT2-204ENST00000553324 WASH4PA8MWX3 477 aa15.68■□□□□ 0.1
SHMT2-204ENST00000553324 RNASEH2AO75792 299 aaKnown RBP15.68■□□□□ 0.1
SHMT2-204ENST00000553324 MT-CO1P00395 513 aa15.68■□□□□ 0.1
SHMT2-204ENST00000553324 CFIP05156 583 aa15.68■□□□□ 0.1
SHMT2-204ENST00000553324 FAM228BP0C875 321 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms