RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 DMTF1Q9Y222 760 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
CKAP4-202ENST00000552828 FLNBO75369 2602 aaKnown RBP12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TBC1D3DA0A087WVF3 549 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TBC1D3IA0A087WXS9 549 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TBC1D3EA0A087X179 549 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TBC1D3KA0A087X1G2 549 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TBC1D3FA6NER0 549 aaPredicted RBP12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TBC1D3LB9A6J9 549 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 F5H5T6 163 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 PLRG1O43660 514 aaKnown RBP12.19□□□□□ -0.46
CKAP4-202ENST00000552828 ATP9BO43861 1147 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TBC1D3HP0C7X1 549 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 SLC2A3P11169 496 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 KRT5P13647 590 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 VAV1P15498 845 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 CKMT2P17540 419 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 ABCG1P45844 678 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 METAP1P53582 386 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 OXCT1P55809 520 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TPM4P67936 248 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 KCNMA1Q12791 1236 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 BNIP3Q12983 259 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TARDBPQ13148 414 aaKnown RBP eCLIP12.19□□□□□ -0.46
CKAP4-202ENST00000552828 IQCB1Q15051 598 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TBC1D3GQ6DHY5 549 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 SMYD5Q6GMV2 418 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TBC1D3CQ6IPX1 549 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 CXorf57Q6NSI4 855 aaKnown RBP12.19□□□□□ -0.46
CKAP4-202ENST00000552828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.19□□□□□ -0.46
CKAP4-202ENST00000552828 PRPF39Q86UA1 669 aaKnown RBP12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TRIM69Q86WT6 500 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 TBC1D3Q8IZP1 549 aaPredicted RBP12.19□□□□□ -0.46
CKAP4-202ENST00000552828 CCAR2Q8N163 923 aaKnown RBP12.19□□□□□ -0.46
CKAP4-202ENST00000552828 ATP6V0D2Q8N8Y2 350 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 ZNF606Q8WXB4 792 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 ALG14Q96F25 216 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 UBL7Q96S82 380 aaPredicted RBP12.19□□□□□ -0.46
CKAP4-202ENST00000552828 CBX8Q9HC52 389 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 SLC12A6Q9UHW9 1150 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 SARDHQ9UL12 918 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 PLXNA2O75051 1894 aa12.19□□□□□ -0.46
CKAP4-202ENST00000552828 A0A1B0GVM2 712 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 TCAF2A6NFQ2 919 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 E5RJQ4 531 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 TK2O00142 265 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 MCF2LO15068 1137 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 ALOX15BO15296 676 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 MED7O43513 233 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 TLX3O43711 291 aaPredicted RBP12.18□□□□□ -0.46
CKAP4-202ENST00000552828 MAGEC1O60732 1142 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 RTN2O75298 545 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 GLI1P08151 1106 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 ATP1A3P13637 1013 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 PDGFRAP16234 1089 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 ACP1P24666 158 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 CLDN6P56747 220 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 PITX1P78337 314 aaPredicted RBP12.18□□□□□ -0.46
CKAP4-202ENST00000552828 APBA1Q02410 837 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 MTA1Q13330 715 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 TAF5Q15542 800 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 ARHGAP44Q17R89 818 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 RABGAP1LQ5R372 815 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 HES3Q5TGS1 186 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 AGBL4Q5VU57 503 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 FAM46CQ5VWP2 391 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 GJB7Q6PEY0 223 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 DSG4Q86SJ6 1040 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 SNIP1Q8TAD8 396 aaKnown RBP12.18□□□□□ -0.46
CKAP4-202ENST00000552828 SLC2A13Q96QE2 648 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 PPP1R9BQ96SB3 815 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 FEM1AQ9BSK4 669 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 PRORYQ9H606 182 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 SIX2Q9NPC8 291 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 ASNSD1Q9NWL6 643 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 DNAJC12Q9UKB3 198 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 OR51B4Q9Y5P0 310 aa12.18□□□□□ -0.46
CKAP4-202ENST00000552828 ASH1LQ9NR48 2969 aaKnown RBP12.18□□□□□ -0.46
CKAP4-202ENST00000552828 EIF4E1BA6NMX2 242 aaKnown RBP12.17□□□□□ -0.46
CKAP4-202ENST00000552828 LGALS16A8MUM7 142 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 GOLGA6L19H0YKK7 550 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 RNGTTO60942 597 aaKnown RBP12.17□□□□□ -0.46
CKAP4-202ENST00000552828 ITPKBP27987 946 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 CCR1P32246 355 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 USP8P40818 1118 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 CDK17Q00537 523 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 UBXN1Q04323 297 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 CNTN1Q12860 1018 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 PDCLQ13371 301 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 ZNF211Q13398 564 aaPredicted RBP12.17□□□□□ -0.46
CKAP4-202ENST00000552828 PROX2Q3B8N5 592 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 C5orf22Q49AR2 442 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 FILIP1LQ4L180 1135 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 KLHDC7AQ5VTJ3 777 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 DPY19L2P1Q6NXN4 242 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 FBXL22Q6P050 247 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 CIR1Q86X95 450 aaPredicted RBP12.17□□□□□ -0.46
CKAP4-202ENST00000552828 WDTC1Q8N5D0 677 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 DCBLD1Q8N8Z6 715 aa12.17□□□□□ -0.46
CKAP4-202ENST00000552828 LSM14AQ8ND56 463 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms