RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 DAAM2Q86T65 1068 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 C1orf210Q8IVY1 113 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 RHOT1Q8IXI2 618 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 CCDC33Q8N5R6 958 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 KDM1BQ8NB78 822 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 PRSS33Q8NF86 280 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 UCMAQ8WVF2 138 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 RAPGEF5Q92565 580 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 KRT35Q92764 455 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 NELL1Q92832 810 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 ARHGEF2Q92974 986 aaKnown RBP9.35□□□□□ -0.91
CCDC59-207ENST00000552606 MUC3BQ9H195 1237 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 MAGEH1Q9H213 219 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 LRRC19Q9H756 370 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 ETNK2Q9NVF9 386 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 SPATA6Q9NWH7 488 aaPredicted RBP9.35□□□□□ -0.91
CCDC59-207ENST00000552606 DNAI1Q9UI46 699 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 VPS28Q9UK41 221 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 ERVW-1Q9UQF0 538 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 HS3ST2Q9Y278 367 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 PPP2R2CQ9Y2T4 447 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 STON1Q9Y6Q2 735 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 MUC6Q6W4X9 2439 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 NUMA1Q14980 2115 aa9.35□□□□□ -0.91
CCDC59-207ENST00000552606 LRRD1A4D1F6 860 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 WASH3PC4AMC7 463 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 RASA4BC9J798 803 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 RASA4O43374 803 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 KRT86O43790 486 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 MFSD11O43934 449 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 RAMP2O60895 175 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 ATG13O75143 517 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 PALMO75781 387 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 CD160O95971 181 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 KRT1P04264 644 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 ATP5BP06576 529 aaKnown RBP9.34□□□□□ -0.91
CCDC59-207ENST00000552606 SRPRAP08240 638 aaKnown RBP9.34□□□□□ -0.91
CCDC59-207ENST00000552606 HOXB2P14652 356 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 AMPD1P23109 780 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 KDELR1P24390 212 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 CTNNA2P26232 953 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 HOXA6P31267 233 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 ETFBP38117 255 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 ARL4AP40617 200 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 SSR1P43307 286 aaKnown RBP9.34□□□□□ -0.91
CCDC59-207ENST00000552606 YBEYP58557 167 aaPredicted RBP9.34□□□□□ -0.91
CCDC59-207ENST00000552606 ECT2LQ008S8 904 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 SULT2A1Q06520 285 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 TCF15Q12870 199 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 KRT81Q14533 505 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 ANGPT1Q15389 498 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 IFI16Q16666 785 aaKnown RBP9.34□□□□□ -0.91
CCDC59-207ENST00000552606 PARP15Q460N3 678 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 EOGTQ5NDL2 527 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 NCBP2-AS2Q69YL0 99 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 KIAA1211LQ6NV74 962 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 ADGRD1Q6QNK2 874 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 NT5DC3Q86UY8 548 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 RASSF3Q86WH2 238 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 TP53INP2Q8IXH6 220 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 KATNAL2Q8IYT4 538 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 CHPFQ8IZ52 775 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 SH2D3CQ8N5H7 860 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 RNF10Q8N5U6 811 aaKnown RBP9.34□□□□□ -0.91
CCDC59-207ENST00000552606 PQLC3Q8N755 202 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 PCDH19Q8TAB3 1148 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 FRS2Q8WU20 508 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 HMCESQ96FZ2 354 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 ZNF830Q96NB3 372 aaPredicted RBP9.34□□□□□ -0.91
CCDC59-207ENST00000552606 HHIPQ96QV1 700 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 C2orf49Q9BVC5 232 aaPredicted RBP9.34□□□□□ -0.91
CCDC59-207ENST00000552606 PDFQ9HBH1 243 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 ATP13A1Q9HD20 1204 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 KCND1Q9NSA2 647 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 FBXO4Q9UKT5 387 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 RAD54BQ9Y620 910 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 DOCK9Q9BZ29 2069 aa9.34□□□□□ -0.91
CCDC59-207ENST00000552606 SCN8AQ9UQD0 1980 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 MYLKQ15746 1914 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 USP34Q70CQ2 3546 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 CACNA1HO95180 2353 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 ZSCAN12O43309 604 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 LAMTOR5O43504 91 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 ATP9BO43861 1147 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 MT-CO1P00395 513 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 SRCP12931 536 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 HLA-EP13747 358 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 WASP42768 502 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 CDKN2BP42772 138 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 CXCL12P48061 93 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 SERPINH1P50454 418 aaKnown RBP9.33□□□□□ -0.92
CCDC59-207ENST00000552606 DGKEP52429 567 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 NDST2P52849 883 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 COPAP53621 1224 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 DMWDQ09019 674 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 SERINC3Q13530 473 aa9.33□□□□□ -0.92
CCDC59-207ENST00000552606 CAMK2GQ13555 558 aaPredicted RBP9.33□□□□□ -0.92
CCDC59-207ENST00000552606 POLD3Q15054 466 aaPredicted RBP9.33□□□□□ -0.92
CCDC59-207ENST00000552606 PAFAH1B3Q15102 231 aaKnown RBP9.33□□□□□ -0.92
CCDC59-207ENST00000552606 E2F5Q15329 346 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms