RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 FAM96AQ9H5X1 160 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 C20orf96Q9NUD7 363 aaPredicted RBP8.34□□□□□ -1.07
CHPT1-208ENST00000552215 DEC1Q9P2X7 70 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 GPR179Q6PRD1 2367 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 KNTC1P50748 2209 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 PLK4O00444 970 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 KLKB1P03952 638 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 TYRP14679 529 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 MAT2AP31153 395 aaKnown RBP8.34□□□□□ -1.07
CHPT1-208ENST00000552215 ELK3P41970 407 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 SGSHP51688 502 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 RAD51Q06609 339 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 NR1H3Q13133 447 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 PTPRRQ15256 657 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 ZRANB3Q5FWF4 1079 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 TMEM31Q5JXX7 168 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 CERCAMQ5T4B2 595 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 ADGRF1Q5T601 910 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 EMC10Q5UCC4 262 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 ITPRIPL1Q6GPH6 555 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 KIAA1324Q6UXG2 1013 aaKnown RBP8.34□□□□□ -1.07
CHPT1-208ENST00000552215 SHKBP1Q8TBC3 707 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 TSNARE1Q96NA8 513 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 NEUROG2Q9H2A3 272 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 CCDC68Q9H2F9 335 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 HEPACAM2A8MVW5 462 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 METTL18O95568 372 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 EPHX1P07099 455 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 MAGEA4P43358 317 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 CREMQ03060 361 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 MARK2Q7KZI7 788 aaKnown RBP8.34□□□□□ -1.07
CHPT1-208ENST00000552215 PQLC3Q8N755 202 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 MYEOVQ96EZ4 313 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 RPP25Q9BUL9 199 aaKnown RBP8.34□□□□□ -1.07
CHPT1-208ENST00000552215 HERC2P3Q9BVR0 1158 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 PAK5Q9P286 719 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 PCDHA11Q9Y5I1 949 aa8.34□□□□□ -1.07
CHPT1-208ENST00000552215 RASGRF2O14827 1237 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 FSCN2O14926 492 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 SYNCRIPO60506 623 aaKnown RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 PBLDP30039 288 aaPredicted RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 SLC8A1P32418 973 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 CDH5P33151 784 aaPredicted RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 GNA12Q03113 381 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 SMARCB1Q12824 385 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 SLC45A4Q5BKX6 768 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 NAIF1Q69YI7 327 aaPredicted RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 CHST9Q7L1S5 443 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 CAMK1DQ8IU85 385 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 PHOSPHO2Q8TCD6 241 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 MFSD1Q9H3U5 465 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 CACNA2D2Q9NY47 1150 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 RRN3Q9NYV6 651 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 SLC17A6Q9P2U8 582 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 CD84Q9UIB8 345 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 TLR6Q9Y2C9 796 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 VIMP08670 466 aaKnown RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 SLC6A4P31645 630 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 AARSP49588 968 aaKnown RBP eCLIP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 PGGT1BP53609 377 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 ENPEPQ07075 957 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 NSUN2Q08J23 767 aaKnown RBP eCLIP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 DHX34Q14147 1143 aaKnown RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 FSCBQ5H9T9 825 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 ARMC12Q5T9G4 340 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 RETSATQ6NUM9 610 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 Q6ZVU0 165 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 TCEAL8Q8IYN2 117 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 UNC5BQ8IZJ1 945 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 EPS8L3Q8TE67 593 aaKnown RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 PRKD2Q9BZL6 878 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 TASP1Q9H6P5 420 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 CTNNAL1Q9UBT7 734 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 RAD54BQ9Y620 910 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 HHLA1C9JL84 531 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 VAPBO95292 243 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 ERVK-10P10266 1014 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 VAV1P15498 845 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 NKX3-2P78367 333 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 HSP90AA5PQ58FG0 334 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 NCBP2-AS2Q69YL0 99 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 DOK6Q6PKX4 331 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 MICALCLQ6ZW33 695 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 APCDD1Q8J025 514 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 XPO6Q96QU8 1125 aaKnown RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 ACSS2Q9NR19 701 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 POLR3BQ9NW08 1133 aaPredicted RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 DONSONQ9NYP3 566 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 SLC25A13Q9UJS0 675 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 CLEC4EQ9ULY5 219 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 AKT1P31749 480 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 STIP1P31948 543 aaKnown RBP8.33□□□□□ -1.08
CHPT1-208ENST00000552215 GABRB2P47870 512 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 RENBPP51606 427 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 TANGO2Q6ICL3 276 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 RHBDF2Q6PJF5 856 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 ZNF567Q8N184 647 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 SPATA6LQ8N4H0 392 aa8.33□□□□□ -1.08
CHPT1-208ENST00000552215 CMASQ8NFW8 434 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms