RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 POM121L1PQ3SYA9 428 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 RRAGAQ7L523 313 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 CIR1Q86X95 450 aaPredicted RBP14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 STK32AQ8WU08 396 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 KAT5Q92993 513 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 GSDMAQ96QA5 445 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 KLHL11Q9NVR0 708 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 FARP1Q9Y4F1 1045 aaPredicted RBP14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 PCDHB1Q9Y5F3 818 aa14.59□□□□□ -0.07
CHMP1A-210ENST00000551981 COL6A6A6NMZ7 2263 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 TDRD6O60522 2096 aaKnown RBP14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 TRIM49BA6NDI0 452 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 P4HA2O15460 535 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 FFAR2O15552 330 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 MED7O43513 233 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 IGLV3-25P01717 112 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 CKMT1AP12532 417 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 AKT2P31751 481 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 CCR1P32246 355 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 PMS1P54277 932 aaKnown RBP14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 GABREP78334 506 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 MTA1Q13330 715 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 DLG2Q15700 870 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 CCDC40Q4G0X9 1142 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 CDCP2Q5VXM1 449 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 CXorf57Q6NSI4 855 aaKnown RBP14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 NEK5Q6P3R8 708 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 Q6ZVU0 165 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 TMC6Q7Z403 805 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 TMEM145Q8NBT3 493 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 WBP1Q96G27 269 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 NAF1Q96HR8 494 aaKnown RBP14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 CCDC114Q96M63 670 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 CEP63Q96MT8 703 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 RPRD1AQ96P16 312 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 PRMT1Q99873 361 aaKnown RBP14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 FEM1AQ9BSK4 669 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 SLC4A5Q9BY07 1137 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 THAP9Q9H5L6 903 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 USP29Q9HBJ7 922 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 VPS28Q9UK41 221 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 CA5BQ9Y2D0 317 aa14.58□□□□□ -0.08
CHMP1A-210ENST00000551981 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 A0A1W2PQU0 124 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 NEMP2A6NFY4 417 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 E5RJQ4 531 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 J3QKU1 62 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 PSMA7O14818 248 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 SLC31A1O15431 190 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 BNIP3LO60238 219 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 OPA1O60313 960 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 USP12O75317 370 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 DXOO77932 396 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 MPOP05164 745 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 GP1BAP07359 652 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 KRT5P13647 590 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 LSSP48449 732 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 DUSP3P51452 185 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 ERVPABLB-1P60509 514 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 CDK17Q00537 523 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 ZNF177Q13360 481 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 DENND1BQ6P3S1 775 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 PCSK4Q6UW60 755 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 SH2D3CQ8N5H7 860 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 LMO3Q8TAP4 145 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 KCNE4Q8WWG9 221 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 HIC2Q96JB3 615 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 MYOCQ99972 504 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 CALN1Q9BXU9 219 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 ABCG4Q9H172 646 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 POLR1BQ9H9Y6 1135 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 DYRK4Q9NR20 520 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 UCKL1Q9NWZ5 548 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 DDIT4Q9NX09 232 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 NLGN3Q9NZ94 848 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 MYO18BQ8IUG5 2567 aa14.57□□□□□ -0.08
CHMP1A-210ENST00000551981 SYNJ2BP-COX16A0A087WUM0 186 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 KPNA3O00505 521 aaPredicted RBP14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 CSO75390 466 aaKnown RBP14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 CLDN11O75508 207 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 PIAS2O75928 621 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 PRLRP16471 622 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 HNRNPA2B1P22626 353 aaKnown RBP14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 TAS2R38P59533 333 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 CENPCQ03188 943 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 PIP5KL1Q5T9C9 394 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 ARHGAP40Q5TG30 622 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 FBXL22Q6P050 247 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 TMEM110Q86TL2 294 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 HORMAD1Q86X24 394 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 ARHGEF19Q8IW93 802 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 EHBP1Q8NDI1 1231 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 FAM174AQ8TBP5 190 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 SMARCE1Q969G3 411 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 IFT43Q96FT9 208 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 DUSP23Q9BVJ7 150 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 DPH1Q9BZG8 443 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 MUC3BQ9H195 1237 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 THSD1Q9NS62 852 aa14.56□□□□□ -0.08
CHMP1A-210ENST00000551981 COX16Q9P0S2 106 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms