RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 NR0B2Q15466 257 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 ACCSLQ4AC99 568 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 Q6ZSR6 202 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 HORMAD1Q86X24 394 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 LINC00301Q8NCQ3 95 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 ERCC4Q92889 916 aaPredicted RBP15.74■□□□□ 0.11
CACNB3-220ENST00000551716 NAT6Q93015 286 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 SERPINB11Q96P15 392 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 ACSL6Q9UKU0 697 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 FARP1Q9Y4F1 1045 aaPredicted RBP15.74■□□□□ 0.11
CACNB3-220ENST00000551716 BOD1L1Q8NFC6 3051 aa15.74■□□□□ 0.11
CACNB3-220ENST00000551716 A6NNZ2 444 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 ATP9BO43861 1147 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 CUTAO60888 179 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 NEBLO76041 1014 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 CSF2P04141 144 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 CENPBP07199 599 aaPredicted RBP15.73■□□□□ 0.11
CACNB3-220ENST00000551716 LCP1P13796 627 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 VAV1P15498 845 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 METAP1P53582 386 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 CUL4BQ13620 913 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 ZNF284Q2VY69 593 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 GUSBP11Q6P575 273 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 ZNF548Q8NEK5 533 aaPredicted RBP15.73■□□□□ 0.11
CACNB3-220ENST00000551716 RNF34Q969K3 372 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 LIN37Q96GY3 246 aaPredicted RBP15.73■□□□□ 0.11
CACNB3-220ENST00000551716 FCRL2Q96LA5 508 aaPredicted RBP15.73■□□□□ 0.11
CACNB3-220ENST00000551716 IL12RB2Q99665 862 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 NUCKS1Q9H1E3 243 aaKnown RBP15.73■□□□□ 0.11
CACNB3-220ENST00000551716 SLC25A18Q9H1K4 315 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 EXOC1Q9NV70 894 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 GEMIN8Q9NWZ8 242 aaKnown RBP15.73■□□□□ 0.11
CACNB3-220ENST00000551716 IPO11Q9UI26 975 aaKnown RBP15.73■□□□□ 0.11
CACNB3-220ENST00000551716 SLC25A13Q9UJS0 675 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 TRAF3IP3Q9Y228 551 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 MYO9AB2RTY4 2548 aa15.73■□□□□ 0.11
CACNB3-220ENST00000551716 PLD2O14939 933 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 STX10O60499 249 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 CD2BP2O95400 341 aaKnown RBP15.72■□□□□ 0.11
CACNB3-220ENST00000551716 LTFP02788 710 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 FAM87AP0C7U9 286 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 TRIM49P0CI25 452 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 TRIM49CP0CI26 452 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 NME1P15531 152 aaKnown RBP15.72■□□□□ 0.11
CACNB3-220ENST00000551716 SYT1P21579 422 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 RPL13P26373 211 aaKnown RBP15.72■□□□□ 0.11
CACNB3-220ENST00000551716 CASP1P29466 404 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 SLC5A2P31639 672 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 TAS2R38P59533 333 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 YWHAEP62258 255 aaKnown RBP15.72■□□□□ 0.11
CACNB3-220ENST00000551716 SPIDRQ14159 915 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 C4orf17Q53FE4 359 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 ZNF542PQ5EBM4 170 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 LGI2Q8N0V4 545 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 FBXO39Q8N4B4 442 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 FBXL13Q8NEE6 735 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 UBA3Q8TBC4 463 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 BTN2A2Q8WVV5 523 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 MYEOVQ96EZ4 313 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 MYOCQ99972 504 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 STRADBQ9C0K7 418 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 DYRK4Q9NR20 520 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 RAB20Q9NX57 234 aa15.72■□□□□ 0.11
CACNB3-220ENST00000551716 SPTAN1Q13813 2472 aaKnown RBP15.72■□□□□ 0.11
CACNB3-220ENST00000551716 SPTY2D1-AS1A0A0U1RR47 76 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 AQP9O43315 295 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 NOBOXO60393 691 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 FBXO21O94952 628 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 PCDH8O95206 1070 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 APOEP02649 317 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 VDRP11473 427 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 CD19P15391 556 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 CR2P20023 1033 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 PSMC2P35998 433 aaKnown RBP15.71■□□□□ 0.11
CACNB3-220ENST00000551716 DLG2Q15700 870 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 NFIL3Q16649 462 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 PIP5KL1Q5T9C9 394 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 TTC39BQ5VTQ0 682 aaPredicted RBP15.71■□□□□ 0.11
CACNB3-220ENST00000551716 SHC4Q6S5L8 630 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 PARGQ86W56 976 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 FAM186BQ8IYM0 893 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 SLC22A18ASQ8N1D0 253 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 KIAA0895Q8NCT3 520 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 KLK6Q92876 244 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 SLC39A13Q96H72 371 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 CCDC114Q96M63 670 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 ADNPQ9H2P0 1102 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 MMRN2Q9H8L6 949 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 FAM13BQ9NYF5 915 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 SLC12A6Q9UHW9 1150 aa15.71■□□□□ 0.11
CACNB3-220ENST00000551716 NVLO15381 856 aaKnown RBP15.7■□□□□ 0.1
CACNB3-220ENST00000551716 LIPCP11150 499 aa15.7■□□□□ 0.1
CACNB3-220ENST00000551716 PDGFRAP16234 1089 aa15.7■□□□□ 0.1
CACNB3-220ENST00000551716 NR2F2P24468 414 aa15.7■□□□□ 0.1
CACNB3-220ENST00000551716 RABIFP47224 123 aa15.7■□□□□ 0.1
CACNB3-220ENST00000551716 CLDN2P57739 230 aa15.7■□□□□ 0.1
CACNB3-220ENST00000551716 MCCD1P59942 119 aaPredicted RBP15.7■□□□□ 0.1
CACNB3-220ENST00000551716 FZD2Q14332 565 aa15.7■□□□□ 0.1
CACNB3-220ENST00000551716 TBR1Q16650 682 aa15.7■□□□□ 0.1
CACNB3-220ENST00000551716 MANEAQ5SRI9 462 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms