RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 LRRC69Q6ZNQ3 347 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 LPCAT2Q7L5N7 544 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 C11orf96Q7Z7L8 435 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 TREML1Q86YW5 311 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 CREBRFQ8IUR6 639 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 UNC45BQ8IWX7 931 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 FAM71AQ8IYT1 594 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 C12orf50Q8NA57 414 aaPredicted RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 ERLEC1Q96DZ1 483 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 TMA16Q96EY4 203 aaKnown RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 SERPINB11Q96P15 392 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 SLC2A13Q96QE2 648 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 CPXM1Q96SM3 734 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 KRTAP4-12Q9BQ66 201 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 TUBGCP2Q9BSJ2 902 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 MKRN2Q9H000 416 aaKnown RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 LHX5Q9H2C1 402 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 TMEM245Q9H330 911 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 NDST4Q9H3R1 872 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 POPDC2Q9HBU9 364 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 ST7Q9NRC1 585 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 SAMSN1Q9NSI8 373 aaKnown RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 USP36Q9P275 1121 aaKnown RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 EVLQ9UI08 416 aaPredicted RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 XPO7Q9UIA9 1087 aaKnown RBP6.89□□□□□ -1.31
TMEM116-208ENST00000549537 DNAJC12Q9UKB3 198 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 PILRBQ9UKJ0 227 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 PCDHGB7Q9Y5F8 929 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 CELSR3Q9NYQ7 3312 aa6.89□□□□□ -1.31
TMEM116-208ENST00000549537 KCNU1A8MYU2 1149 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 KCNJ18B7U540 433 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 CDX4O14627 284 aaPredicted RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 TIMM44O43615 452 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 TBL1XO60907 577 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 ZNF217O75362 1048 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 TRUB2O95900 331 aaKnown RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 PABPC1P11940 636 aaKnown RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 ITPKAP23677 461 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 MZF1P28698 734 aaPredicted RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 CD70P32970 193 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 CDH5P33151 784 aaPredicted RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 HOXD12P35452 270 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 ANP32AP39687 249 aaKnown RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 USP8P40818 1118 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 MAPK8P45983 427 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 SLC11A2P49281 568 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 RPS24P62847 133 aaKnown RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 YWHAZP63104 245 aaKnown RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 IRX4P78413 519 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 RPL6Q02878 288 aaKnown RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 CAMK2GQ13555 558 aaPredicted RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 KCNJ12Q14500 433 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 PTPN20Q4JDL3 420 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 TCP11X2Q5H9J9 407 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 MS4A13Q5J8X5 152 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 KLHDC7AQ5VTJ3 777 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 OTUD1Q5VV17 481 aaPredicted RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 CDKAL1Q5VV42 579 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 SLC23A3Q6PIS1 610 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 OLFML1Q6UWY5 402 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 SLC36A4Q6YBV0 504 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 ARMCX6Q7L4S7 300 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 SLC47A2Q86VL8 602 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 SYT12Q8IV01 421 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 PASD1Q8IV76 773 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 SLC41A1Q8IVJ1 513 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 FAM114A1Q8IWE2 563 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 HJURPQ8NCD3 748 aaPredicted RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 ENOX1Q8TC92 643 aaKnown RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 WFIKKN2Q8TEU8 576 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 UCMAQ8WVF2 138 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 DDX1Q92499 740 aaKnown RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 PIGKQ92643 395 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 GOLGA1Q92805 767 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 TTC17Q96AE7 1141 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 FAM149B1Q96BN6 582 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 ZNF419Q96HQ0 510 aaPredicted RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 PPP1R13BQ96KQ4 1090 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 PRMT1Q99873 361 aaKnown RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 EDEM2Q9BV94 578 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 TRIM62Q9BVG3 475 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 LSM14BQ9BX40 385 aaKnown RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 CIPCQ9C0C6 399 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 ABCB8Q9NUT2 735 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 ASNSD1Q9NWL6 643 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 GGA2Q9UJY4 613 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 INTS6Q9UL03 887 aaKnown RBP6.88□□□□□ -1.31
TMEM116-208ENST00000549537 CYP8B1Q9UNU6 501 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 FHOD1Q9Y613 1164 aa6.88□□□□□ -1.31
TMEM116-208ENST00000549537 FREM2Q5SZK8 3169 aa6.87□□□□□ -1.31
TMEM116-208ENST00000549537 NYNRINQ9P2P1 1898 aaKnown RBP6.87□□□□□ -1.31
TMEM116-208ENST00000549537 IGSF10Q6WRI0 2623 aa6.87□□□□□ -1.31
TMEM116-208ENST00000549537 ATXN2Q99700 1313 aaKnown RBP6.87□□□□□ -1.31
TMEM116-208ENST00000549537 C4orf47A7E2U8 309 aa6.87□□□□□ -1.31
TMEM116-208ENST00000549537 AP5Z1O43299 807 aa6.87□□□□□ -1.31
TMEM116-208ENST00000549537 ERBB2P04626 1255 aa6.87□□□□□ -1.31
TMEM116-208ENST00000549537 GLI1P08151 1106 aa6.87□□□□□ -1.31
TMEM116-208ENST00000549537 ADRB1P08588 477 aa6.87□□□□□ -1.31
TMEM116-208ENST00000549537 HLA-EP13747 358 aa6.87□□□□□ -1.31
TMEM116-208ENST00000549537 UCHL3P15374 230 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms