RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 PDK2Q15119 407 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 PARP15Q460N3 678 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 KIAA1324Q6UXG2 1013 aaKnown RBP17.21■□□□□ 0.35
LTBR-215ENST00000546296 LINGO4Q6UY18 593 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 UMODL1-AS1Q8N2C9 162 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 OR2T3Q8NH03 318 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 MYO19Q96H55 970 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 CELF6Q96J87 481 aaKnown RBP17.21■□□□□ 0.35
LTBR-215ENST00000546296 CSPG4P5Q96PW8 444 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 CALN1Q9BXU9 219 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 ACE2Q9BYF1 805 aaPredicted RBP17.21■□□□□ 0.35
LTBR-215ENST00000546296 LACRTQ9GZZ8 138 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 MTG2Q9H4K7 406 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 PRDM16Q9HAZ2 1276 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 PRSS16Q9NQE7 514 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 KLHL11Q9NVR0 708 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 ALG6Q9Y672 507 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 DUSP10Q9Y6W6 482 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 TARSL2A2RTX5 802 aaKnown RBP17.2■□□□□ 0.34
LTBR-215ENST00000546296 BTNL10A8MVZ5 291 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 PJA2O43164 708 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 KDELR3O43731 214 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 RNASEH1O60930 286 aaKnown RBP17.2■□□□□ 0.34
LTBR-215ENST00000546296 SIN3BO75182 1162 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 MT-CO1P00395 513 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 NDUFV2P19404 249 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 AMPD1P23109 780 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 CNR2P34972 360 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 VASPP50552 380 aaPredicted RBP17.2■□□□□ 0.34
LTBR-215ENST00000546296 NDST2P52849 883 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 NHLH1Q02575 133 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 BYSLQ13895 437 aaKnown RBP17.2■□□□□ 0.34
LTBR-215ENST00000546296 DPYSQ14117 519 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 GSE1Q14687 1217 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 DLG2Q15700 870 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 CEP68Q76N32 757 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 DAAM2Q86T65 1068 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 TMPRSS6Q8IU80 811 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 RHOT1Q8IXI2 618 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 SH2D3CQ8N5H7 860 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 TPCN2Q8NHX9 752 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 PRCCQ92733 491 aaPredicted RBP17.2■□□□□ 0.34
LTBR-215ENST00000546296 MRGPRX1Q96LB2 322 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 SLC6A17Q9H1V8 727 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 NOL6Q9H6R4 1146 aaKnown RBP17.2■□□□□ 0.34
LTBR-215ENST00000546296 CD248Q9HCU0 757 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 RCOR3Q9P2K3 495 aaPredicted RBP17.2■□□□□ 0.34
LTBR-215ENST00000546296 INVSQ9Y283 1065 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 MUC6Q6W4X9 2439 aa17.2■□□□□ 0.34
LTBR-215ENST00000546296 ARHGAP42A6NI28 874 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 K7ERQ8 282 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 HRO43593 1189 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 ATP9BO43861 1147 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 BNIP3LO60238 219 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 RPP40O75818 363 aaKnown RBP17.19■□□□□ 0.34
LTBR-215ENST00000546296 ZMPSTE24O75844 475 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 PTMAP06454 111 aaKnown RBP17.19■□□□□ 0.34
LTBR-215ENST00000546296 CD48P09326 243 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 ACADMP11310 421 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 SRCP12931 536 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 GEMIN4P57678 1058 aaKnown RBP17.19■□□□□ 0.34
LTBR-215ENST00000546296 MMRN1Q13201 1228 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 SRSF5Q13243 272 aaKnown RBP17.19■□□□□ 0.34
LTBR-215ENST00000546296 IFI16Q16666 785 aaKnown RBP17.19■□□□□ 0.34
LTBR-215ENST00000546296 C9orf64Q5T6V5 341 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 LRRC38Q5VT99 294 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 C11orf63Q6NUN7 778 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 TMCO3Q6UWJ1 677 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 LEKR1Q6ZMV7 388 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 LZTR1Q8N653 840 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 GAB3Q8WWW8 586 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 SIPA1Q96FS4 1042 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 HMCESQ96FZ2 354 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 MKRN2Q9H000 416 aaKnown RBP17.19■□□□□ 0.34
LTBR-215ENST00000546296 FBRSQ9HAH7 460 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 SALL4Q9UJQ4 1053 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 HS3ST2Q9Y278 367 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 ADGRG1Q9Y653 693 aa17.19■□□□□ 0.34
LTBR-215ENST00000546296 LRRD1A4D1F6 860 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 ZSCAN5CA6NGD5 496 aaPredicted RBP17.18■□□□□ 0.34
LTBR-215ENST00000546296 DFFAO00273 331 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 MAP3K13O43283 966 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 LILRB5O75023 590 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 VAV1P15498 845 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 NBL1P41271 181 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 PAPOLAP51003 745 aaKnown RBP17.18■□□□□ 0.34
LTBR-215ENST00000546296 DNA2P51530 1060 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 ARSEP51690 589 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 CLCN6P51797 869 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 COPAP53621 1224 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 SERINC3Q13530 473 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 SIM2Q14190 667 aaPredicted RBP17.18■□□□□ 0.34
LTBR-215ENST00000546296 DPYSL3Q14195 570 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 PRR23BQ6ZRT6 265 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 CACUL1Q86Y37 369 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 FAM71BQ8TC56 605 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 FRS2Q8WU20 508 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 RLN3Q8WXF3 142 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 RAPGEF5Q92565 580 aa17.18■□□□□ 0.34
LTBR-215ENST00000546296 TSC1Q92574 1164 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms