RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 RCOR3Q9P2K3 495 aaPredicted RBP15.45■□□□□ 0.06
CD9-210ENST00000543916 SLC25A13Q9UJS0 675 aa15.45■□□□□ 0.06
CD9-210ENST00000543916 HCN4Q9Y3Q4 1203 aa15.45■□□□□ 0.06
CD9-210ENST00000543916 FANCMQ8IYD8 2048 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 C3orf70A6NLC5 250 aaPredicted RBP15.44■□□□□ 0.06
CD9-210ENST00000543916 RASA4BC9J798 803 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 CBX4O00257 560 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 RASA4O43374 803 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 NRDCO43847 1150 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 APBB3O95704 486 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 MT-CO1P00395 513 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 PTMAP06454 111 aaKnown RBP15.44■□□□□ 0.06
CD9-210ENST00000543916 GABRG2P18507 467 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 KDELR1P24390 212 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 HOXA6P31267 233 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 ETFBP38117 255 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 MARCKSL1P49006 195 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 FNTBP49356 437 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 YBEYP58557 167 aaPredicted RBP15.44■□□□□ 0.06
CD9-210ENST00000543916 ARF5P84085 180 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 PDK2Q15119 407 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 ZFYVE27Q5T4F4 411 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 AFMIDQ63HM1 303 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 HEATR6Q6AI08 1181 aaKnown RBP15.44■□□□□ 0.06
CD9-210ENST00000543916 IL31Q6EBC2 164 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 ANO7Q6IWH7 933 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 SH2D3CQ8N5H7 860 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 MDGA1Q8NFP4 955 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 HMCESQ96FZ2 354 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 CALR3Q96L12 384 aaKnown RBP15.44■□□□□ 0.06
CD9-210ENST00000543916 ZNF830Q96NB3 372 aaPredicted RBP15.44■□□□□ 0.06
CD9-210ENST00000543916 ZNF670Q9BS34 389 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 SLC6A17Q9H1V8 727 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 POLMQ9NP87 494 aaPredicted RBP15.44■□□□□ 0.06
CD9-210ENST00000543916 HS3ST2Q9Y278 367 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 ACTL7AQ9Y615 435 aa15.44■□□□□ 0.06
CD9-210ENST00000543916 LRRD1A4D1F6 860 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 K7ERQ8 282 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 PSTPIP1O43586 416 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 CD160O95971 181 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 KRT1P04264 644 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 CCDC175P0C221 793 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 SRCP12931 536 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 VAV1P15498 845 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 NDUFV2P19404 249 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 VASPP50552 380 aaPredicted RBP15.43■□□□□ 0.06
CD9-210ENST00000543916 NDST2P52849 883 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 COPAP53621 1224 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 PTPN5P54829 565 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 SERINC3Q13530 473 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 CAMK2GQ13555 558 aaPredicted RBP15.43■□□□□ 0.06
CD9-210ENST00000543916 STARD3Q14849 445 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 HNRNPA1L2Q32P51 320 aaKnown RBP15.43■□□□□ 0.06
CD9-210ENST00000543916 PARP15Q460N3 678 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 ANKRD20A8PQ5CZ79 823 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 RASSF3Q86WH2 238 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 TP53INP2Q8IXH6 220 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 PCDH19Q8TAB3 1148 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 FRS2Q8WU20 508 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 HMGB4Q8WW32 186 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 KRT35Q92764 455 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 FAF2Q96CS3 445 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 TPSD1Q9BZJ3 242 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 SLC39A8Q9C0K1 460 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 PRSS16Q9NQE7 514 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 DDX56Q9NY93 547 aaKnown RBP15.43■□□□□ 0.06
CD9-210ENST00000543916 CAPN6Q9Y6Q1 641 aa15.43■□□□□ 0.06
CD9-210ENST00000543916 SMAD6O43541 496 aaKnown RBP15.42■□□□□ 0.06
CD9-210ENST00000543916 KDELR3O43731 214 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 ATP9BO43861 1147 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 SYNCRIPO60506 623 aaKnown RBP15.42■□□□□ 0.06
CD9-210ENST00000543916 SIN3BO75182 1162 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 PALMO75781 387 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 C9orf64Q5T6V5 341 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 TMCO3Q6UWJ1 677 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 LEKR1Q6ZMV7 388 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 WDR5BQ86VZ2 330 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 ZNF354CQ86Y25 554 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 MAP7D3Q8IWC1 876 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 ATP11CQ8NB49 1132 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 KIAA1524Q8TCG1 905 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 PTPRN2Q92932 1015 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 FAM126AQ9BYI3 521 aaPredicted RBP15.42■□□□□ 0.06
CD9-210ENST00000543916 TSGA10Q9BZW7 698 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 MKRN2Q9H000 416 aaKnown RBP15.42■□□□□ 0.06
CD9-210ENST00000543916 DONSONQ9NYP3 566 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 EBF1Q9UH73 591 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 SUN2Q9UH99 717 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 GUCA1BQ9UMX6 200 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 NUP205Q92621 2012 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 PLXND1Q9Y4D7 1925 aa15.42■□□□□ 0.06
CD9-210ENST00000543916 EDDM13A0A1B0GTR0 161 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 ZNF487B1APH4 448 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 AXIN1O15169 862 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 KRT86O43790 486 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 MFSD11O43934 449 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 ALDH1A2O94788 518 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 CTNNA1P35221 906 aaKnown RBP15.41■□□□□ 0.06
CD9-210ENST00000543916 NNMTP40261 264 aa15.41■□□□□ 0.06
CD9-210ENST00000543916 SERPINH1P50454 418 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms