RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CLCN4P51793 760 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 YBEYP58557 167 aaPredicted RBP9.53□□□□□ -0.88
GNE-206ENST00000543356 MAGOHP61326 146 aaKnown RBP9.53□□□□□ -0.88
GNE-206ENST00000543356 TNK2Q07912 1038 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 PRPSAP1Q14558 356 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 PLPP4Q5VZY2 271 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 KCTD11Q693B1 232 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 LGI2Q8N0V4 545 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 ELMOD1Q8N336 334 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 SIGLEC10Q96LC7 697 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 AGAP3Q96P47 875 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 DDX50Q9BQ39 737 aaKnown RBP9.53□□□□□ -0.88
GNE-206ENST00000543356 C17orf80Q9BSJ5 609 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 IPO11Q9UI26 975 aaKnown RBP9.53□□□□□ -0.88
GNE-206ENST00000543356 RABGEF1Q9UJ41 708 aa9.53□□□□□ -0.88
GNE-206ENST00000543356 MTCL1Q9Y4B5 1905 aaKnown RBP9.52□□□□□ -0.88
GNE-206ENST00000543356 GBF1Q92538 1859 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 HIDE1A8MVS5 230 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 RAMP2O60895 175 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 NEBLO76041 1014 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 KLKB1P03952 638 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 MBL2P11226 248 aaPredicted RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 GCAP28676 217 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 SSTR1P30872 391 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 STX2P32856 288 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 MNAT1P51948 309 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 CDH4P55283 916 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 PPP2R2AP63151 447 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 TTC39BQ5VTQ0 682 aaPredicted RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 C3orf62Q6ZUJ4 267 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 CHST9Q7L1S5 443 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 DENND1CQ8IV53 801 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 CNTD1Q8N815 330 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 MYEOVQ96EZ4 313 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 HMCESQ96FZ2 354 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 SAMD11Q96NU1 681 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 FCRL5Q96RD9 977 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 EBNA1BP2Q99848 306 aaKnown RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 MLPHQ9BV36 600 aaPredicted RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 ZC3H7BQ9UGR2 993 aaKnown RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 HELZP42694 1942 aaKnown RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 F5H423 210 aaPredicted RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 LPXNO60711 386 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 PEX11BO96011 259 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 GABRR2P28476 465 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 CDC25CP30307 473 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 GRIA1P42261 906 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 GEMIN4P57678 1058 aaKnown RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 ADGRF1Q5T601 910 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 DNAJC14Q6Y2X3 702 aaPredicted RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 CAPN12Q6ZSI9 719 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 FBF1Q8TES7 1133 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 MRPS31Q92665 395 aaKnown RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 PRICKLE1Q96MT3 831 aaPredicted RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 GCNAQ96QF7 691 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 DHRS4Q9BTZ2 278 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 LRRC40Q9H9A6 602 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 GLOD4Q9HC38 313 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 TRPC7Q9HCX4 862 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 GKN1Q9NS71 199 aa9.52□□□□□ -0.89
GNE-206ENST00000543356 AGO1Q9UL18 857 aaKnown RBP9.52□□□□□ -0.89
GNE-206ENST00000543356 CHD5Q8TDI0 1954 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 SDR42E2A6NKP2 422 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 A6NNZ2 444 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 H3BNC9 293 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 AP3B1O00203 1094 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 SHOX2O60902 331 aaPredicted RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 CLDN11O75508 207 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 FGF19O95750 216 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 CALRP27797 417 aaKnown RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 OR1E1P30953 314 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 SLC7A9P82251 487 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 IL10RBQ08334 325 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 NR1H3Q13133 447 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 MTM1Q13496 603 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 HNRNPDQ14103 355 aaKnown RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 POLD3Q15054 466 aaPredicted RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 TUBB8Q3ZCM7 444 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 PPM1LQ5SGD2 360 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 STEAP4Q687X5 459 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 PDE12Q6L8Q7 609 aaKnown RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 TAOK1Q7L7X3 1001 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 CIR1Q86X95 450 aaPredicted RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 CCNJLQ8IV13 435 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 TEX26Q8N6G2 289 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 CFAP36Q96G28 342 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 ZNF419Q96HQ0 510 aaPredicted RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 XPO6Q96QU8 1125 aaKnown RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 CYTH2Q99418 400 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 NAT9Q9BTE0 207 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 CNOT10Q9H9A5 744 aaKnown RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 SP110Q9HB58 689 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 CASS4Q9NQ75 786 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 ASAH2Q9NR71 780 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 PSMC3IPQ9P2W1 217 aaPredicted RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 CTNNAL1Q9UBT7 734 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 AAR2Q9Y312 384 aaKnown RBP9.51□□□□□ -0.89
GNE-206ENST00000543356 TTLL3Q9Y4R7 772 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 PCDHA11Q9Y5I1 949 aa9.51□□□□□ -0.89
GNE-206ENST00000543356 ZFP37Q9Y6Q3 630 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms