RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 RAC2P15153 192 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 NME1P15531 152 aaKnown RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ATF6P18850 670 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 XPAP23025 273 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 STAT1P42224 750 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 GPR15P49685 360 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 MAP3K7CLP57077 242 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 SNX16P57768 344 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 BPIFB4P59827 614 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 INPP5AQ14642 412 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 STILQ15468 1287 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 GOLGA7BQ2TAP0 167 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 CYP4A22Q5TCH4 519 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 SDHAF4Q5VUM1 108 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ARHGAP17Q68EM7 881 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 PDZD4Q76G19 769 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 HDXQ7Z353 690 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 GRASPQ7Z6J2 395 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 FUKQ8N0W3 1084 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ZSCAN18Q8TBC5 510 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 DIO2Q92813 273 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 TRIM63Q969Q1 353 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 PSMG2Q969U7 264 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 UTP4Q969X6 686 aaKnown RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 PPP1R14AQ96A00 147 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ZNF707Q96C28 371 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 TBC1D31Q96DN5 1066 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 SPATA17Q96L03 361 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 CEP295NLQ96MC4 621 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ASB2Q96Q27 587 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 UBL7Q96S82 380 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 NUDT16L1Q9BRJ7 211 aaKnown RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 NUP58Q9BVL2 599 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 DUSP16Q9BY84 665 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 TRIM5Q9C035 493 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ATXN3LQ9H3M9 355 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 DMAP1Q9NPF5 467 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ASAH2Q9NR71 780 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 EHD2Q9NZN4 543 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 CRIM1Q9NZV1 1036 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 DNMT3BQ9UBC3 853 aaKnown RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 MAGED2Q9UNF1 606 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 LRCH1Q9Y2L9 728 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ACTL7BQ9Y614 415 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 CDH23Q9H251 3354 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 A0A087WV62 115 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 PRAMEF27A3QJZ7 478 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 SLC38A8A6NNN8 435 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 EIF3FO00303 357 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ZNF197O14709 1029 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 EPHB6O15197 1021 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 PAPLNO95428 1278 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 FGF19O95750 216 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 CALCAP01258 141 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 RHOP08100 348 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 CCDC172P0C7W6 258 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 PNMA6AP0CW24 399 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 MTHFD1P11586 935 aaKnown RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 MYL4P12829 197 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 KRT9P35527 623 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 FLT3P36888 993 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 PIK3CBP42338 1070 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ZNF132P52740 706 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 BCAT1P54687 386 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 CNGA2Q16280 664 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 PABPC1LQ4VXU2 614 aaKnown RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ZC3H12AQ5D1E8 599 aaKnown RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 PLBD1Q6P4A8 553 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 LCLAT1Q6UWP7 414 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 DENND5BQ6ZUT9 1274 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 PAQR9Q6ZVX9 377 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 MILR1Q7Z6M3 343 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 DNAJB7Q7Z6W7 309 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 C12orf40Q86WS4 652 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 HEATR4Q86WZ0 1026 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 FAM71AQ8IYT1 594 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ARL10Q8N8L6 244 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ANKRD52Q8NB46 1076 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 LEMD2Q8NC56 503 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 C2CD4AQ8NCU7 369 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 TFAP2BQ92481 460 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 SUSD6Q92537 303 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 HDAC2Q92769 488 aaKnown RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ATP6V1E2Q96A05 226 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 IQCDQ96DY2 449 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 TEKT5Q96M29 485 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 FANCD2OSQ96PS1 177 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 GCNAQ96QF7 691 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 KCNK16Q96T55 309 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 SMOQ99835 787 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 GPR88Q9GZN0 384 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 PDCL3Q9H2J4 239 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 WDR6Q9NNW5 1121 aaKnown RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 ARFGAP3Q9NP61 516 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 HCFC1R1Q9NWW0 138 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 UXTQ9UBK9 157 aaPredicted RBP5.33□□□□□ -1.56
CLIP1-217ENST00000543205 TSPAN16Q9UKR8 245 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 TTLL3Q9Y4R7 772 aa5.33□□□□□ -1.56
CLIP1-217ENST00000543205 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.33□□□□□ -1.568e-8■■■□□ 15.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms