RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 NDRG1Q92597 394 aaKnown RBP13.17□□□□□ -0.3
DDX11-223ENST00000542838 DRC3Q9H069 523 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 ZNF696Q9H7X3 374 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 WDR41Q9HAD4 459 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 ERAP1Q9NZ08 941 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 SLC39A10Q9ULF5 831 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 WDR90Q96KV7 1748 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 STX16-NPEPL1H3BU86 382 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 TK2O00142 265 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 TIMM44O43615 452 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 STRNO43815 780 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 FAM58BPP0C7Q3 252 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 TFEBP19484 476 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 SAT1P21673 171 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 SCNN1AP37088 669 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 MATKP42679 507 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 USP46P62068 366 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 TMEM259Q4ZIN3 620 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 ARL13AQ5H913 290 aaPredicted RBP13.17□□□□□ -0.3
DDX11-223ENST00000542838 LIPMQ5VYY2 423 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 TMEM135Q86UB9 458 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 KCNMB4Q86W47 210 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 ZFP28Q8NHY6 868 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 MARK4Q96L34 752 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 IARS2Q9NSE4 1012 aaKnown RBP13.17□□□□□ -0.3
DDX11-223ENST00000542838 C20orf96Q9NUD7 363 aaPredicted RBP13.17□□□□□ -0.3
DDX11-223ENST00000542838 DDX18Q9NVP1 670 aaKnown RBP13.17□□□□□ -0.3
DDX11-223ENST00000542838 MCM3APO60318 1980 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 SCN4AP35499 1836 aa13.17□□□□□ -0.3
DDX11-223ENST00000542838 GRID2O43424 1007 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 TSPAN1O60635 241 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 TRPA1O75762 1119 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 DPP6P42658 865 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 INHBCP55103 352 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 PITX1P78337 314 aaPredicted RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 CDKL1Q00532 357 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 ITGA7Q13683 1181 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 DCAF6Q58WW2 860 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 CERCAMQ5T4B2 595 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 UNC93AQ86WB7 457 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 CPSF7Q8N684 471 aaKnown RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 VPS39Q96JC1 886 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 SCYL1Q96KG9 808 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 TSNARE1Q96NA8 513 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 ZDHHC2Q9UIJ5 367 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 CDYLQ9Y232 598 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 GOLGA8TH3BQL2 631 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 HNRNPRO43390 633 aaKnown RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 AP2A1O95782 977 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 TCN1P20061 433 aaPredicted RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 ACADSBP45954 432 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 SLC25A52Q3SY17 297 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 ZNF484Q5JVG2 852 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 ZYG11AQ6WRX3 759 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 PDCD6IPQ8WUM4 868 aaKnown RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 DLG3Q92796 817 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 TMA16Q96EY4 203 aaKnown RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 ZMAT2Q96NC0 199 aaKnown RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 RBM38Q9H0Z9 239 aaKnown RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 EFCAB1Q9HAE3 211 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 PRDM16Q9HAZ2 1276 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 RNF19AQ9NV58 838 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 TUBGCP4Q9UGJ1 667 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 TLK1Q9UKI8 766 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 DMTF1Q9Y222 760 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 ZSWIM8A7E2V4 1837 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 PRSS51A0A1B0GVH4 220 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 EEF2KO00418 725 aaKnown RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 APOA4P06727 396 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 PTPN3P26045 913 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 GLRBP48167 497 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 HSPA13P48723 471 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 PGGT1BP53609 377 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 NAGLUP54802 743 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 CSE1LP55060 971 aaKnown RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 PRKAA1Q13131 559 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 PAOXQ6QHF9 649 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 APOBEC3FQ8IUX4 373 aaKnown RBP13.16□□□□□ -0.3
DDX11-223ENST00000542838 DDI1Q8WTU0 396 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 KLHL32Q96NJ5 620 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 PREBQ9HCU5 417 aa13.16□□□□□ -0.3
DDX11-223ENST00000542838 SLC22A2O15244 555 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 BCAS2O75934 225 aaPredicted RBP13.15□□□□□ -0.3
DDX11-223ENST00000542838 GRM5P41594 1212 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 PPP2R5DQ14738 602 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 GRM3Q14832 879 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 PAFAH1B3Q15102 231 aaKnown RBP13.15□□□□□ -0.3
DDX11-223ENST00000542838 NOL9Q5SY16 702 aaKnown RBP13.15□□□□□ -0.3
DDX11-223ENST00000542838 GADL1Q6ZQY3 521 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 C18orf25Q96B23 403 aaPredicted RBP13.15□□□□□ -0.3
DDX11-223ENST00000542838 APOL2Q9BQE5 337 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 MRPL1Q9BYD6 325 aaKnown RBP13.15□□□□□ -0.3
DDX11-223ENST00000542838 ZNF385DQ9H6B1 395 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 CASS4Q9NQ75 786 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 PDGFCQ9NRA1 345 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 SNTG2Q9NY99 539 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 HSFX1Q9UBD0 423 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 LMO2P25791 158 aa13.15□□□□□ -0.3
DDX11-223ENST00000542838 HK2P52789 917 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms