RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CA5BQ9Y2D0 317 aa9.77□□□□□ -0.85
YBX3-211ENST00000541351 KIF3AQ9Y496 699 aa9.77□□□□□ -0.85
YBX3-211ENST00000541351 TTC34A8MYJ7 566 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 TBL1XO60907 577 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 PHACTR2O75167 634 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 BEST1O76090 585 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 CCDC130P13994 396 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 LIFP15018 202 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 PRLRP16471 622 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 PDCP20941 246 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 BLKP51451 505 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 SLC8A3P57103 927 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 ZNF542PQ5EBM4 170 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 AGBL4Q5VU57 503 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 LVRNQ6Q4G3 990 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 ACOT1Q86TX2 421 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 UNC45BQ8IWX7 931 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 ZC3H3Q8IXZ2 948 aaKnown RBP9.76□□□□□ -0.85
YBX3-211ENST00000541351 CACNA2D3Q8IZS8 1091 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 SLC22A18ASQ8N1D0 253 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 SDR16C5Q8N3Y7 309 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 PRR7Q8TB68 274 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 RNF139Q8WU17 664 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 JAKMIP2Q96AA8 810 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 CCDC114Q96M63 670 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 TAAR9Q96RI9 348 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 PPP1R9BQ96SB3 815 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 ASPSCR1Q9BZE9 553 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 LRRN3Q9H3W5 708 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 VRTNQ9H8Y1 702 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 GPN2Q9H9Y4 310 aaPredicted RBP9.76□□□□□ -0.85
YBX3-211ENST00000541351 APOBEC3BQ9UH17 382 aaKnown RBP9.76□□□□□ -0.85
YBX3-211ENST00000541351 SLC5A6Q9Y289 635 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 NME7Q9Y5B8 376 aa9.76□□□□□ -0.85
YBX3-211ENST00000541351 TDRD6O60522 2096 aaKnown RBP9.76□□□□□ -0.85
YBX3-211ENST00000541351 RP1P56715 2156 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 A0A1W2PQU0 124 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 VWA3AA6NCI4 1184 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 C9orf172C9J069 976 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 PPP1R37O75864 691 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 LDLRP01130 860 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 ALPIP09923 528 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 DLATP10515 647 aaKnown RBP9.75□□□□□ -0.85
YBX3-211ENST00000541351 ADORA2BP29275 332 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 MAN1A1P33908 653 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 GUCY1B3Q02153 619 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 CNTN1Q12860 1018 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 FZD2Q14332 565 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 ZNF699Q32M78 642 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 PRRT3Q5FWE3 981 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 ARL6IP4Q66PJ3 421 aaKnown RBP9.75□□□□□ -0.85
YBX3-211ENST00000541351 DIEXFQ68CQ4 756 aaKnown RBP9.75□□□□□ -0.85
YBX3-211ENST00000541351 CLEC20AQ6ZU45 233 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 SFR1Q86XK3 245 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 CRYBG2Q8N1P7 616 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 FSTL5Q8N475 847 aaPredicted RBP9.75□□□□□ -0.85
YBX3-211ENST00000541351 JPH3Q8WXH2 748 aaPredicted RBP9.75□□□□□ -0.85
YBX3-211ENST00000541351 LARP4BQ92615 738 aaKnown RBP9.75□□□□□ -0.85
YBX3-211ENST00000541351 CCDC74AQ96AQ1 378 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 PPP1R13BQ96KQ4 1090 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 MRGPRX3Q96LB0 322 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 CBWD1Q9BRT8 395 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 PCIF1Q9H4Z3 704 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 GULP1Q9UBP9 304 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 PCDHB3Q9Y5E6 796 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 PCDHGA3Q9Y5H0 932 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 MTORP42345 2549 aa9.75□□□□□ -0.85
YBX3-211ENST00000541351 COL27A1Q8IZC6 1860 aaPredicted RBP9.74□□□□□ -0.85
YBX3-211ENST00000541351 NF1P21359 2839 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 CSMD1Q96PZ7 3565 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 FPGTO14772 594 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 HGSO14964 777 aaPredicted RBP9.74□□□□□ -0.85
YBX3-211ENST00000541351 PCDH8O95206 1070 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 KIF20AO95235 890 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 CST3P01034 146 aaPredicted RBP9.74□□□□□ -0.85
YBX3-211ENST00000541351 C4BPAP04003 597 aaKnown RBP9.74□□□□□ -0.85
YBX3-211ENST00000541351 PRKAR1AP10644 381 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 TCN2P20062 427 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 THOP1P52888 689 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 AP3M2P53677 418 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 ADKP55263 362 aaKnown RBP9.74□□□□□ -0.85
YBX3-211ENST00000541351 YWHAGP61981 247 aaKnown RBP eCLIP9.74□□□□□ -0.85
YBX3-211ENST00000541351 CCL7P80098 99 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 ZFP36L1Q07352 338 aaKnown RBP9.74□□□□□ -0.85
YBX3-211ENST00000541351 SLC12A1Q13621 1099 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 PDE1CQ14123 709 aaPredicted RBP9.74□□□□□ -0.85
YBX3-211ENST00000541351 DRAP1Q14919 205 aaPredicted RBP9.74□□□□□ -0.85
YBX3-211ENST00000541351 ELOCQ15369 112 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 ZNF284Q2VY69 593 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 DEFB109BQ30KR1 87 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 PITRM1Q5JRX3 1037 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 PHF19Q5T6S3 580 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 PIK3R6Q5UE93 754 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 SCARA3Q6AZY7 606 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 GCNT7Q6ZNI0 430 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 GPRIN1Q7Z2K8 1008 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 SCD5Q86SK9 330 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 CCNJLQ8IV13 435 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 RAD54LQ92698 747 aa9.74□□□□□ -0.85
YBX3-211ENST00000541351 PPP1R16AQ96I34 528 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms