RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ZNF784Q8NCA9 323 aaPredicted RBP17.54■□□□□ 0.4
SPIDR-227ENST00000541342 RAB3IL1Q8TBN0 382 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 MTBPQ96DY7 904 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 SH3GL3Q99963 347 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 PPP1R12CQ9BZL4 782 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 C1orf21Q9H246 121 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 TMEM161AQ9NX61 479 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 MAGEA13PA6NCF6 341 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 BIRC5O15392 142 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 AOC1P19801 751 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 GATMP50440 423 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 IRX4P78413 519 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 PDE1BQ01064 536 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 MBLAC2Q68D91 279 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 PM20D1Q6GTS8 502 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 MAVSQ7Z434 540 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 PSTKQ8IV42 348 aaKnown RBP17.54■□□□□ 0.4
SPIDR-227ENST00000541342 GALNT15Q8N3T1 639 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 SCAMP5Q8TAC9 235 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 APBB2Q92870 758 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 PAK6Q9NQU5 681 aaPredicted RBP17.54■□□□□ 0.4
SPIDR-227ENST00000541342 ANGPTL2Q9UKU9 493 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 MAD1L1Q9Y6D9 718 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 TTC3P53804 2025 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 TMEM189-UBE2V1I3L0A0 370 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 ARRB2P32121 409 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 LRRC39Q96DD0 335 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 XAB2Q9HCS7 855 aaKnown RBP17.54■□□□□ 0.4
SPIDR-227ENST00000541342 MOCS1Q9NZB8 636 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 DTLQ9NZJ0 730 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 NR2E3Q9Y5X4 410 aa17.54■□□□□ 0.4
SPIDR-227ENST00000541342 ALDOAP04075 364 aaKnown RBP17.53■□□□□ 0.4
SPIDR-227ENST00000541342 CRABP2P29373 138 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 TSPY1Q01534 308 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 CDC16Q13042 620 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 DNAL1Q4LDG9 190 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 LGSNQ5TDP6 509 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 CWF19L1Q69YN2 538 aaKnown RBP17.53■□□□□ 0.4
SPIDR-227ENST00000541342 C16orf46Q6P387 395 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 KYAT3Q6YP21 454 aaKnown RBP17.53■□□□□ 0.4
SPIDR-227ENST00000541342 RAPH1Q70E73 1250 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 RNF139Q8WU17 664 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 DEFB118Q96PH6 123 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 FAM72CH0Y354 149 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 SORBS2O94875 1100 aaKnown RBP17.53■□□□□ 0.4
SPIDR-227ENST00000541342 LYNP07948 512 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 GSTA2P09210 222 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 FGF3P11487 239 aaPredicted RBP17.53■□□□□ 0.4
SPIDR-227ENST00000541342 FAM72AQ5TYM5 149 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 C1orf146Q5VVC0 180 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 FAM72DQ6L9T8 149 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 FAM72BQ86X60 149 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 NETO2Q8NC67 525 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 RILPQ96NA2 401 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 TTC1Q99614 292 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 ECSITQ9BQ95 431 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 THAP1Q9NVV9 213 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 HCSTQ9UBK5 93 aa17.53■□□□□ 0.4
SPIDR-227ENST00000541342 PRKCGP05129 697 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 ZFXP17010 805 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-227ENST00000541342 STX3Q13277 289 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 BFSP2Q13515 415 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 FASTKD1Q53R41 847 aaKnown RBP17.52■□□□□ 0.4
SPIDR-227ENST00000541342 TEDDM1Q5T9Z0 273 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 TIFABQ6ZNK6 161 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 PGAP3Q96FM1 320 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-227ENST00000541342 TUBGCP5Q96RT8 1024 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 RCOR3Q9P2K3 495 aaPredicted RBP17.52■□□□□ 0.4
SPIDR-227ENST00000541342 PCDHA11Q9Y5I1 949 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 ARL4AP40617 200 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 SLC25A3Q00325 362 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 DSG1Q02413 1049 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 MAPRE1Q15691 268 aaKnown RBP17.52■□□□□ 0.4
SPIDR-227ENST00000541342 GSTA3Q16772 222 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 KCNT2Q6UVM3 1135 aa17.52■□□□□ 0.4
SPIDR-227ENST00000541342 CREB3O43889 395 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 ADRA1BP35368 520 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 NR2C2P49116 596 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 ROR2Q01974 943 aaKnown RBP17.52■□□□□ 0.39
SPIDR-227ENST00000541342 TBCCQ15814 346 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 SLC39A12Q504Y0 691 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 TMCO4Q5TGY1 634 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 BSPRYQ5W0U4 402 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 IRGQQ8WZA9 623 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 CASD1Q96PB1 797 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 OLFM3Q96PB7 478 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 TRAPPC9Q96Q05 1148 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 NR1H4Q96RI1 486 aaPredicted RBP17.52■□□□□ 0.39
SPIDR-227ENST00000541342 GPAMQ9HCL2 828 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 DDIT4Q9NX09 232 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 NDE1Q9NXR1 346 aa17.52■□□□□ 0.39
SPIDR-227ENST00000541342 MYO16Q9Y6X6 1858 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 ARHGEF37A1IGU5 675 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 MFSD11O43934 449 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 PQBP1O60828 265 aaKnown RBP17.51■□□□□ 0.39
SPIDR-227ENST00000541342 GCATO75600 419 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 OAZ2O95190 189 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 PGFP49763 221 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 RALGPS1Q5JS13 557 aa17.51■□□□□ 0.39
SPIDR-227ENST00000541342 SPATA2LQ8IUW3 424 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms