RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 FRMD7Q6ZUT3 714 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 ANKRD23Q86SG2 305 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 PHTF2Q8N3S3 785 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 FBXW8Q8N3Y1 598 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 CPSF7Q8N684 471 aaKnown RBP17.13■□□□□ 0.33
CACNB3-203ENST00000540990 ZMIZ2Q8NF64 920 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 SLC10A4Q96EP9 437 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 MFSD3Q96ES6 412 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 VPS39Q96JC1 886 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 GATA5Q9BWX5 397 aaPredicted RBP17.13■□□□□ 0.33
CACNB3-203ENST00000540990 DRC3Q9H069 523 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 VCX3BQ9H321 246 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 POMPQ9Y244 141 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 RAP2CQ9Y3L5 183 aa17.13■□□□□ 0.33
CACNB3-203ENST00000540990 MYO18AQ92614 2054 aaKnown RBP17.13■□□□□ 0.33
CACNB3-203ENST00000540990 FNDC1Q4ZHG4 1894 aaPredicted RBP17.13■□□□□ 0.33
CACNB3-203ENST00000540990 ZNF638Q14966 1978 aaKnown RBP17.13■□□□□ 0.33
CACNB3-203ENST00000540990 SYNJ2BP-COX16A0A087WUM0 186 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 HHLA1C9JL84 531 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 MATN2O00339 956 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 PEX1O43933 1283 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 USP12O75317 370 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 CABYRO75952 493 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 COL6A2P12110 1019 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 NFKB1P19838 968 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 GMPRP36959 345 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 LHX1P48742 406 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 MAP3K7CLP57077 242 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 R3HDM1Q15032 1099 aaKnown RBP17.12■□□□□ 0.33
CACNB3-203ENST00000540990 ANO4Q32M45 955 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 SLC9B1Q4ZJI4 515 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 HSP90AA5PQ58FG0 334 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 CERCAMQ5T4B2 595 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 FAM35AQ86V20 835 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 CCDC117Q8IWD4 279 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-203ENST00000540990 CNTN4Q8IWV2 1026 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 TNS4Q8IZW8 715 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 SCML4Q8N228 414 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 SLC25A41Q8N5S1 370 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 DNAAF3Q8N9W5 541 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 ZNF483Q8TF39 744 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-203ENST00000540990 AZIN2Q96A70 460 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 AGAP3Q96P47 875 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 KCNK16Q96T55 309 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 COLEC11Q9BWP8 271 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 RHOJQ9H4E5 214 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 ZNF385DQ9H6B1 395 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 SPATS2LQ9NUQ6 558 aaKnown RBP17.12■□□□□ 0.33
CACNB3-203ENST00000540990 COX16Q9P0S2 106 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 VPS28Q9UK41 221 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 PRPF19Q9UMS4 504 aaKnown RBP17.12■□□□□ 0.33
CACNB3-203ENST00000540990 SSX2IPQ9Y2D8 614 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 BAG2O95816 211 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 LTFP02788 710 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 HOXC8P31273 242 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 IRF9Q00978 393 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 CDH17Q12864 832 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 NAPEPLDQ6IQ20 393 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 ACAD11Q709F0 780 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 LINC00523Q86TU6 105 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 KBTBD6Q86V97 674 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 TDRD5Q8NAT2 981 aaKnown RBP17.12■□□□□ 0.33
CACNB3-203ENST00000540990 NPLOC4Q8TAT6 608 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 MAPK15Q8TD08 544 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 IRGQQ8WZA9 623 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 EPAS1Q99814 870 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 MED10Q9BTT4 135 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 OXCT2Q9BYC2 517 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-203ENST00000540990 ILKAPQ9H0C8 392 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-203ENST00000540990 SLC24A3Q9HC58 644 aa17.12■□□□□ 0.33
CACNB3-203ENST00000540990 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.12■□□□□ 0.33
CACNB3-203ENST00000540990 TARM1B6A8C7 271 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 DYNC1LI2O43237 492 aaPredicted RBP17.11■□□□□ 0.33
CACNB3-203ENST00000540990 MAP3K13O43283 966 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 DCXO43602 365 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 SBK3P0C264 359 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 NCF2P19878 526 aaPredicted RBP17.11■□□□□ 0.33
CACNB3-203ENST00000540990 PSEN2P49810 448 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 GTF2A2P52657 109 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 USP4Q13107 963 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 HERC3Q15034 1050 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 DLG2Q15700 870 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 LIPMQ5VYY2 423 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 RAPH1Q70E73 1250 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 PLEKHH3Q7Z736 793 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 ZC3HC1Q86WB0 502 aaKnown RBP17.11■□□□□ 0.33
CACNB3-203ENST00000540990 DEFB107AQ8IZN7 70 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 STYXQ8WUJ0 223 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 SENP8Q96LD8 212 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 PGLYRP2Q96PD5 576 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 TSC22D3Q99576 134 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 CSNK1G1Q9HCP0 422 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 TCF7L2Q9NQB0 619 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 C20orf96Q9NUD7 363 aaPredicted RBP17.11■□□□□ 0.33
CACNB3-203ENST00000540990 SLC38A7Q9NVC3 462 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 RNF181Q9P0P0 153 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 TBC1D30Q9Y2I9 924 aa17.11■□□□□ 0.33
CACNB3-203ENST00000540990 SLCO1B7G3V0H7 640 aa17.1■□□□□ 0.33
CACNB3-203ENST00000540990 H3BNX3 289 aa17.1■□□□□ 0.33
CACNB3-203ENST00000540990 KIF3CO14782 793 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms