RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 AVENQ9NQS1 362 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-243ENST00000540387 KCNH7Q9NS40 1196 aa9.66□□□□□ -0.86
CTNNA1-243ENST00000540387 PARVAQ9NVD7 372 aa9.66□□□□□ -0.86
CTNNA1-243ENST00000540387 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.66□□□□□ -0.86
CTNNA1-243ENST00000540387 PKD2L1Q9P0L9 805 aa9.66□□□□□ -0.86
CTNNA1-243ENST00000540387 TMEM9Q9P0T7 183 aa9.66□□□□□ -0.86
CTNNA1-243ENST00000540387 PTBP2Q9UKA9 531 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-243ENST00000540387 NOP56O00567 594 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 TSPAN1O60635 241 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 KRT18P05783 430 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 NAGAP17050 411 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 CTRB1P17538 263 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 ETFBP38117 255 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 ATXN3P54252 364 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 COPZ1P61923 177 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 CRHR2Q13324 411 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 DPYSQ14117 519 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 MAPRE1Q15691 268 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 NPTX1Q15818 432 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 NFE2Q16621 373 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 CBWD6Q4V339 395 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 CBWD3Q5JTY5 395 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 CBWD5Q5RIA9 395 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 RNASEH2BQ5TBB1 312 aaKnown RBP9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 SLX4IPQ5VYV7 408 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 CTRB2Q6GPI1 263 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 TTC33Q6PID6 262 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 C17orf99Q6UX52 265 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 DEPDC4Q8N2C3 294 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 DNERQ8NFT8 737 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 PEX13Q92968 403 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 SH3YL1Q96HL8 342 aaPredicted RBP9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 TXNDC15Q96J42 360 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 C8orf48Q96LL4 319 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 VPS35Q96QK1 796 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 SEMA6AQ9H2E6 1030 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 ADGRA2Q96PE1 1338 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 A0A0G2JMZ2 1700 aa9.65□□□□□ -0.86
CTNNA1-243ENST00000540387 DNAJC25-GNG10A0A024R161 153 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 ARHGEF35A5YM69 484 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 TBX3O15119 743 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 RGS20O76081 388 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 KCNH1O95259 989 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 COX4I1P13073 169 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 CCND2P30279 289 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 MS4A2Q01362 244 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 GAD2Q05329 585 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 HIF1AQ16665 826 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 UGT3A1Q6NUS8 523 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 C16orf46Q6P387 395 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 ZCCHC23Q6ZST2 131 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 ZNF598Q86UK7 904 aaKnown RBP9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 SLFN12Q8IYM2 578 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 DCLK2Q8N568 766 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 PDPRQ8NCN5 879 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 FAM20AQ96MK3 541 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 ZNF778Q96MU6 729 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 KLHL32Q96NJ5 620 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 SERPINI1Q99574 410 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 ZNF577Q9BSK1 485 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 CLPBQ9H078 707 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 RUBCNLQ9H714 662 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 NXF1Q9UBU9 619 aaKnown RBP9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 KCNN3Q9UGI6 736 aa9.65□□□□□ -0.87
CTNNA1-243ENST00000540387 AURKAO14965 403 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 CDH1P12830 882 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 M6PRP20645 277 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 ADORA2AP29274 412 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 STX1BP61266 288 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 ECT2LQ008S8 904 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 MTMR1Q13613 665 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 MSS51Q4VC12 460 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 GJC2Q5T442 439 aaPredicted RBP9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 PDPK2PQ6A1A2 396 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 PLEKHG7Q6ZR37 379 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 GPR142Q7Z601 462 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 PHTF2Q8N3S3 785 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 ABHD11Q8NFV4 315 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 YME1L1Q96TA2 773 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 WDR83Q9BRX9 315 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 PLLPQ9Y342 182 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 HTRA2O43464 458 aaPredicted RBP9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 PEX14O75381 377 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 PSMD10O75832 226 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 GZMAP12544 262 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 FGFR3P22607 806 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 IL4RP24394 825 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 SPIRE1Q08AE8 756 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 GRSF1Q12849 480 aaKnown RBP eCLIP9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 STILQ15468 1287 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 AGMOQ6ZNB7 445 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 PRR23CQ6ZRP0 262 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 GLRX5Q86SX6 157 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 PDCD6IPQ8WUM4 868 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 DLG3Q92796 817 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 RMDN1Q96DB5 314 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 RTKNQ9BST9 563 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 TMEM121Q9BTD3 319 aa9.64□□□□□ -0.87
CTNNA1-243ENST00000540387 EMILIN2Q9BXX0 1053 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms