RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 CBX4O00257 560 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 RASA4O43374 803 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 PSTPIP1O43586 416 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 KRT86O43790 486 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 PALMO75781 387 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 ZMPSTE24O75844 475 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 PAPSS2O95340 614 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 TDGF1P13385 188 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 MARCKSL1P49006 195 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 YBEYP58557 167 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 ST8SIA6P61647 398 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 ARF5P84085 180 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 DMWDQ09019 674 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 ANKRD20A8PQ5CZ79 823 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 LINGO4Q6UY18 593 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 ZNF662Q6ZS27 426 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 MAP7D3Q8IWC1 876 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 TP53INP2Q8IXH6 220 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 UMODL1-AS1Q8N2C9 162 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 NPWQ8N729 165 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 KRT35Q92764 455 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 RNF25Q96BH1 459 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 HMCESQ96FZ2 354 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 ZNF670Q9BS34 389 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 C2orf49Q9BVC5 232 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 LRRC19Q9H756 370 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 LZTFL1Q9NQ48 299 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 FBXO4Q9UKT5 387 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 ACTL7AQ9Y615 435 aa13.01□□□□□ -0.33
TSPAN9-207ENST00000539631 SHROOM3Q8TF72 1996 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 TTC34A8MYJ7 566 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 KDELR3O43731 214 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 MT-CO1P00395 513 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 EPHX1P07099 455 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 SP9P0CG40 484 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 ETFBP38117 255 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 PXNP49023 591 aaPredicted RBP13□□□□□ -0.33
TSPAN9-207ENST00000539631 DGKEP52429 567 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 NDST2P52849 883 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 AFMIDQ63HM1 303 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 TMCO3Q6UWJ1 677 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 NT5DC3Q86UY8 548 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 ZNF354CQ86Y25 554 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 ARHGAP12Q8IWW6 846 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 SH2D3CQ8N5H7 860 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 RNF10Q8N5U6 811 aaKnown RBP13□□□□□ -0.33
TSPAN9-207ENST00000539631 KDM1BQ8NB78 822 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 TSTD1Q8NFU3 115 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 PCDH19Q8TAB3 1148 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 FAF2Q96CS3 445 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 CD248Q9HCU0 757 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 POLMQ9NP87 494 aaPredicted RBP13□□□□□ -0.33
TSPAN9-207ENST00000539631 DONSONQ9NYP3 566 aa13□□□□□ -0.33
TSPAN9-207ENST00000539631 CACNA1IQ9P0X4 2223 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 TCRBV21S2A2A0A5A6 115 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 H0Y858 1186 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 K7ERQ8 282 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 DFFAO00273 331 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 APBB3O95704 486 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 FTCDO95954 541 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 CD160O95971 181 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 SRCP12931 536 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 CTNNA2P26232 953 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 CTNNA1P35221 906 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 NNMTP40261 264 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 PAPOLAP51003 745 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 TCF15Q12870 199 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 SERINC3Q13530 473 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 STARD3Q14849 445 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 PARP15Q460N3 678 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 ACCSLQ4AC99 568 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 ODF2Q5BJF6 829 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 NCBP2-AS2Q69YL0 99 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 HEATR6Q6AI08 1181 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 RETSATQ6NUM9 610 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 MFSD7Q6UXD7 560 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 LEKR1Q6ZMV7 388 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 PEX26Q7Z412 305 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 KATNAL2Q8IYT4 538 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 SYCE1Q8N0S2 351 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 CAMKK1Q8N5S9 505 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 LZTR1Q8N653 840 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 PQLC3Q8N755 202 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 ATP11CQ8NB49 1132 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 RNF157Q96PX1 679 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 PRRX2Q99811 253 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 SLC6A17Q9H1V8 727 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 PRSS16Q9NQE7 514 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 SUN2Q9UH99 717 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 AMFRQ9UKV5 643 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 HPCAL4Q9UM19 191 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 PACSIN2Q9UNF0 486 aaPredicted RBP12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 HS3ST2Q9Y278 367 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 PCDHA3Q9Y5H8 950 aa12.99□□□□□ -0.33
TSPAN9-207ENST00000539631 FANCMQ8IYD8 2048 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 ARHGAP42A6NI28 874 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 ZNF487B1APH4 448 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 J3KR12 359 aa12.98□□□□□ -0.33
TSPAN9-207ENST00000539631 SMAD6O43541 496 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms