RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CPOXP36551 454 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 PTH2RP49190 550 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CDH8P55286 799 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 GAGE5Q13069 117 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 GAGE6Q13070 117 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CBFBQ13951 182 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TOB2Q14106 344 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 RRP1BQ14684 758 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TBCEQ15813 527 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 EZH2Q15910 746 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CDO1Q16878 200 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 USP41Q3LFD5 358 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 LRCH2Q5VUJ6 765 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SNX30Q5VWJ9 437 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 LAIR1Q6GTX8 287 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ACAD10Q6JQN1 1059 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 LAYNQ6UX15 382 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CLEC9AQ6UXN8 241 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 Q6ZPA2 131 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 RTL10Q7L3V2 364 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 NEK8Q86SG6 692 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ARMC8Q8IUR7 673 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 RASGRP3Q8IV61 690 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 C4orf19Q8IY42 314 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 LRRC56Q8IYG6 542 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ADGRF3Q8IZF5 1079 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 THAP6Q8TBB0 222 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 UCMAQ8WVF2 138 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ST8SIA4Q92187 359 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 MOAP1Q96BY2 351 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TIGD1Q96MW7 591 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CAMK1GQ96NX5 476 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 MYADMQ96S97 322 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 NCAPGQ9BPX3 1015 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ELOVL1Q9BW60 279 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 GATA5Q9BWX5 397 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ITPAQ9BY32 194 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 UNKLQ9H9P5 680 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SELENONQ9NZV5 590 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 AASSQ9UDR5 926 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TBC1D29Q9UFV1 150 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 DDX49Q9Y6V7 483 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 NPEPPSL1A6NEC2 478 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 WIPF3A6NGB9 483 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 PRR32B1ATL7 298 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF213O14771 459 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TLX3O43711 291 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 VIPP01282 170 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ZSCAN22P10073 491 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 GNAT2P19087 354 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 GKP32189 559 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CDAP32320 146 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 HOXD13P35453 343 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SLC16A2P36021 539 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 PBX3P40426 434 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 GARSP41250 739 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ARSEP51690 589 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CACNA2D1P54289 1103 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 YWHAZP63104 245 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CEBPZQ03701 1054 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 FOXE3Q13461 319 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TP53BP2Q13625 1128 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ERV3-1Q14264 604 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 KRT32Q14532 448 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 PRKD1Q15139 912 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 NTRK2Q16620 822 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 C5orf22Q49AR2 442 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 FNDC7Q5VTL7 733 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 JADE1Q6IE81 842 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TPRG1Q6ZUI0 275 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 RSRC2Q7L4I2 434 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CHST3Q7LGC8 479 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 VRK3Q8IV63 474 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TEX45Q8NA69 505 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 GLG1Q92896 1179 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 R3HDM4Q96D70 268 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF503Q96F45 646 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 EDC3Q96F86 508 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 LENG8Q96PV6 779 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SEC62Q99442 399 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 MNTQ99583 582 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SYT17Q9BSW7 474 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SLC25A23Q9BV35 468 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 NPLQ9BXD5 320 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 GPR63Q9BZJ6 419 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 C12orf65Q9H3J6 166 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SLC32A1Q9H598 525 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 STN1Q9H668 368 aaKnown RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 EPHX3Q9H6B9 360 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CHODLQ9H9P2 273 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 SEMA4GQ9NTN9 838 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 GIMAP4Q9NUV9 329 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 PCDHGB4Q9UN71 923 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 PCDHA10Q9Y5I2 948 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 NOX1Q9Y5S8 564 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 KIF13AQ9H1H9 1805 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 CC2D2AQ9P2K1 1620 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 NPIPB15A6NHN6 443 aaPredicted RBP1.14□□□□□ -2.23
HIF1A-204ENST00000539097 AGAP14A8MT82 685 aa1.14□□□□□ -2.23
HIF1A-204ENST00000539097 TOR1BO14657 336 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms