RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 CHKBQ9Y259 395 aa7.02□□□□□ -1.28
SORT1-209ENST00000538502 BCS1LQ9Y276 419 aa7.02□□□□□ -1.28
SORT1-209ENST00000538502 FRMPD4Q14CM0 1322 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 PRR36Q9H6K5 1346 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 PRMT5O14744 637 aaPredicted RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 GSC2O15499 205 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 LTA4HP09960 611 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 CLCN5P51795 746 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 CYP2R1Q6VVX0 501 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SPATA19Q7Z5L4 167 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 MILR1Q7Z6M3 343 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 BPIFB6Q8NFQ5 453 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 ZSCAN18Q8TBC5 510 aaPredicted RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 TPD52L3Q96J77 140 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SENP6Q9GZR1 1112 aaPredicted RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 ACTR8Q9H981 624 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 ETNK2Q9NVF9 386 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 CCDC167Q9P0B6 97 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SH3BP1Q9Y3L3 701 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 NDUFB10O96000 172 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SERPINA1P01009 418 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 IDO1P14902 403 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 GRIA3P42263 894 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 LIPMQ5VYY2 423 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 MFSD14CQ5VZR4 134 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 EGFLAMQ63HQ2 1017 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 ERAP2Q6P179 960 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 POTEHQ6S545 545 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 CBWD2Q8IUF1 395 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 C4orf19Q8IY42 314 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SCAIQ8N9R8 606 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SYTL5Q8TDW5 730 aaPredicted RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 MRPL57Q9BQC6 102 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 MTMR12Q9C0I1 747 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 CDH19Q9H159 772 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SYNPO2Q9UMS6 1093 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SIK3Q9Y2K2 1263 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 PEX16Q9Y5Y5 336 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 H3BN98 237 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SLC37A4O43826 429 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 MPZL2O60487 215 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 MED24O75448 989 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 TADA2AO75478 443 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 VAPBO95292 243 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 PIGNO95427 931 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 HNRNPH3P31942 346 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 GSSP48637 474 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 PPP4CP60510 307 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 TROAPQ12815 778 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 FSCN1Q16658 493 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 FBXO42Q6P3S6 717 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 MFSD7Q6UXD7 560 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 PIWIL4Q7Z3Z4 852 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 NKAPQ8N5F7 415 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 MCFD2Q8NI22 146 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 RXFP2Q8WXD0 754 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 DDX43Q9NXZ2 648 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 ANGPT4Q9Y264 503 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 MYO3AQ8NEV4 1616 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 OPLAHO14841 1288 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 CHST10O43529 356 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 ENTPD5O75356 428 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 PCNAP12004 261 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 ZNF7P17097 686 aaPredicted RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 MGAT1P26572 445 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 CCNHP51946 323 aaPredicted RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 LYPLAL1Q5VWZ2 237 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 FAM180AQ6UWF9 173 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 FAM220AQ7Z4H9 259 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SH3RF1Q7Z6J0 888 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 DDX53Q86TM3 631 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 HERC6Q8IVU3 1022 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 IZUMO1Q8IYV9 350 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 MARCH10Q8NA82 808 aaPredicted RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 UXS1Q8NBZ7 420 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SLC5A5Q92911 643 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 ACOX2Q99424 681 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SLC4A5Q9BY07 1137 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 NMRK2Q9NPI5 230 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 TBCCD1Q9NVR7 557 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 SLC25A13Q9UJS0 675 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 LOC100506127A0A0U1RQW1 187 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 LIASO43766 372 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 KHDRBS3O75525 346 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 ALDH1A2O94788 518 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 LYNP07948 512 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 TXNP10599 105 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 SSTR1P30872 391 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 PTSQ03393 145 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 NIPA1Q7RTP0 329 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 RASGEF1CQ8N431 466 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 NELL1Q92832 810 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 TMCO6Q96DC7 493 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 PANX3Q96QZ0 392 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 RBM4BQ9BQ04 359 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 RBM4Q9BWF3 364 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 ANKHQ9HCJ1 492 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 KCNH7Q9NS40 1196 aa7.02□□□□□ -1.29
SORT1-209ENST00000538502 TRNAU1APQ9NX07 287 aaKnown RBP7.02□□□□□ -1.29
SORT1-209ENST00000538502 ZC3H13Q5T200 1668 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms