RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 PPP1R2P3Q6NXS1 205 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 TTC33Q6PID6 262 aaPredicted RBP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 GPR142Q7Z601 462 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 CALML6Q8TD86 181 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 TFAP2CQ92754 450 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 VCPIP1Q96JH7 1222 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 ZIC5Q96T25 663 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 CBWD1Q9BRT8 395 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 SEMA6AQ9H2E6 1030 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 TMEM206Q9H813 350 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 GPRC5CQ9NQ84 441 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 MYH9P35579 1960 aaKnown RBP11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 LOXHD1Q8IVV2 1947 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 PLXNA1Q9UIW2 1896 aa11.57□□□□□ -0.56
SEMA4D-221ENST00000537934 RGS13O14921 159 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 CLPXO76031 633 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 PSAPP07602 524 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 TCF4P15884 667 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 CCNA2P20248 432 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 GRK2P25098 689 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 RPL10P27635 214 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 MZF1P28698 734 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 NLRP11P59045 1033 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 IFITM2Q01629 132 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 FAM110CQ1W6H9 321 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 XKR9Q5GH70 373 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 MAMDC4Q6UXC1 1216 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 ARMCX2Q7L311 632 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 PGAM4Q8N0Y7 254 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 ZNF786Q8N393 782 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 TAB3Q8N5C8 712 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 RDM1Q8NG50 284 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 FEZF2Q8TBJ5 459 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 ZNF347Q96SE7 839 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 SLC29A1Q99808 456 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 C11orf70Q9BRQ4 267 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 SLC4A5Q9BY07 1137 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 HSPBP1Q9NZL4 362 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 KCND2Q9NZV8 630 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 ABT1Q9ULW3 272 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 TMA7Q9Y2S6 64 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 TISP43B9A030 160 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 KMOO15229 486 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 STBD1O95210 358 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 SUPT20HL2P0C7V6 817 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 CHRNB1P11230 501 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 NUMBP49757 651 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 PKNOX1P55347 436 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 RPL10AP62906 217 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 BASP1P80723 227 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 PRKCEQ02156 737 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 TAF1CQ15572 869 aaPredicted RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 ZNF792Q3KQV3 632 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 FAM117BQ6P1L5 589 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 TTC23LQ6PF05 361 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 POLNQ7Z5Q5 900 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 ZC3H7AQ8IWR0 971 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 PDZD8Q8NEN9 1154 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 COPS5Q92905 334 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 CFAP36Q96G28 342 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 HERC2P3Q9BVR0 1158 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 NAA50Q9GZZ1 169 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 DUS2Q9NX74 493 aaKnown RBP11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 PRELID1Q9Y255 219 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 ATP11BQ9Y2G3 1177 aa11.56□□□□□ -0.56
SEMA4D-221ENST00000537934 AKAP10O43572 662 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 GMNNO75496 209 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 BCL10O95999 233 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 SLC10A3P09131 477 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 SOX10P56693 466 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 DPYSL3Q14195 570 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 HSDL1Q3SXM5 330 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 GJC2Q5T442 439 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 EPGNQ6UW88 154 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 ATG14Q6ZNE5 492 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 USP43Q70EL4 1123 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 ENOSF1Q7L5Y1 443 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 HAUS6Q7Z4H7 955 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 ELMOD1Q8N336 334 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 TMCO5AQ8N6Q1 288 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 RP9Q8TA86 221 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 ACTL9Q8TC94 416 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 ATP6V1E2Q96A05 226 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 TUBA1CQ9BQE3 449 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 SMARCAD1Q9H4L7 1026 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 NANOGQ9H9S0 305 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 MOV10Q9HCE1 1003 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 DDX56Q9NY93 547 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 SEPT9Q9UHD8 586 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 TRAF6Q9Y4K3 522 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 MANSC4A6NHS7 340 aaPredicted RBP11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 ZNF839A8K0R7 811 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 CENPBD1B2RD01 187 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 JRKO75564 520 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 MAP4P27816 1152 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 PIK3R1P27986 724 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 POLR2BP30876 1174 aaKnown RBP11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 TMBIM6P55061 237 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 ADAM17P78536 824 aa11.55□□□□□ -0.56
SEMA4D-221ENST00000537934 NSUN2Q08J23 767 aaKnown RBP eCLIP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms