RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 EIF2B4Q9UI10 523 aaKnown RBP15.17■□□□□ 0.02
USP28-204ENST00000537642 NEU3Q9UQ49 428 aa15.17■□□□□ 0.02
USP28-204ENST00000537642 HS3ST2Q9Y278 367 aa15.17■□□□□ 0.02
USP28-204ENST00000537642 NCKAP1Q9Y2A7 1128 aa15.17■□□□□ 0.02
USP28-204ENST00000537642 NCOR2Q9Y618 2525 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 ILVBLA1L0T0 632 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 DDX3XO00571 662 aaKnown RBP eCLIP15.16■□□□□ 0.021e-9■■■■□ 20
USP28-204ENST00000537642 ATMINO43313 823 aaPredicted RBP15.16■□□□□ 0.02
USP28-204ENST00000537642 PLEKP08567 350 aaPredicted RBP15.16■□□□□ 0.02
USP28-204ENST00000537642 SRCP12931 536 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 GNSP15586 552 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 GLDCP23378 1020 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 KRT83P78385 493 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 GFPT1Q06210 699 aaPredicted RBP15.16■□□□□ 0.02
USP28-204ENST00000537642 KLHL30Q0D2K2 578 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 PPP1R2P3Q6NXS1 205 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 Q6ZVU0 165 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 ZCCHC9Q8N567 271 aaKnown RBP15.16■□□□□ 0.02
USP28-204ENST00000537642 AADATQ8N5Z0 425 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 C1orf216Q8TAB5 229 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 GANCQ8TET4 914 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 CNPY3Q9BT09 278 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 MIR1-1HGQ9H1L0 117 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 NEUROG2Q9H2A3 272 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 NDFIP2Q9NV92 336 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.16■□□□□ 0.02
USP28-204ENST00000537642 SLCO1B1Q9Y6L6 691 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 KNL1Q8NG31 2342 aa15.16■□□□□ 0.02
USP28-204ENST00000537642 A0A1B0GTW7 788 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 A0A1W2PQJ5 194 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 ANKRD62A6NC57 917 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 K7ERQ8 282 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 ARHGAP33O14559 1287 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 LRIG2O94898 1065 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 ADH1BP00325 375 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 IL1BP01584 269 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 GZMAP12544 262 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 C5AR1P21730 350 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 METAP1P53582 386 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 SCAPQ12770 1279 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 MAMLD1Q13495 774 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 UAP1L1Q3KQV9 507 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 DAB2IPQ5VWQ8 1189 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 PLEKHA7Q6IQ23 1121 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 RWDD4Q6NW29 188 aaKnown RBP15.15■□□□□ 0.02
USP28-204ENST00000537642 SCYL2Q6P3W7 929 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 DCUN1D2Q6PH85 259 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 LRSAM1Q6UWE0 723 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 LINGO4Q6UY18 593 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 ZNF783Q6ZMS7 281 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 SLFN11Q7Z7L1 901 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 NLRP14Q86W24 1093 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 DRC7Q8IY82 874 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 PYROXD2Q8N2H3 581 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 HDDC3Q8N4P3 179 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 OR8D1Q8WZ84 308 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 SNX19Q92543 992 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 BIRC7Q96CA5 298 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 OMDQ99983 421 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 GTPBP2Q9BX10 602 aaKnown RBP15.15■□□□□ 0.02
USP28-204ENST00000537642 PARVAQ9NVD7 372 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 IFNKQ9P0W0 207 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 ADAMTS1Q9UHI8 967 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 SARDHQ9UL12 918 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 FZD4Q9ULV1 537 aa15.15■□□□□ 0.02
USP28-204ENST00000537642 BCAT2O15382 392 aaPredicted RBP15.14■□□□□ 0.01
USP28-204ENST00000537642 SMAD6O43541 496 aaKnown RBP15.14■□□□□ 0.01
USP28-204ENST00000537642 RTN2O75298 545 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 RNASEH2AO75792 299 aaKnown RBP15.14■□□□□ 0.01
USP28-204ENST00000537642 ZMPSTE24O75844 475 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 FSBPO95073 299 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 FTLP02792 175 aaPredicted RBP15.14■□□□□ 0.01
USP28-204ENST00000537642 RHOQP17081 205 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 GOT1P17174 413 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 DRD3P35462 400 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 GALCP54803 685 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 GNA12Q03113 381 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 SFSWAPQ12872 951 aaKnown RBP15.14■□□□□ 0.01
USP28-204ENST00000537642 HGSNATQ68CP4 663 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 NCEH1Q6PIU2 408 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 TMC6Q7Z403 805 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 ATP11CQ8NB49 1132 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 OR2I1PQ8NGU4 316 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 TBC1D31Q96DN5 1066 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 ORAI3Q9BRQ5 295 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 SPON2Q9BUD6 331 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 RETREG1Q9H6L5 497 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 ATP13A1Q9HD20 1204 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 TMEM248Q9NWD8 314 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 PPM1HQ9ULR3 514 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 FZD10Q9ULW2 581 aa15.14■□□□□ 0.01
USP28-204ENST00000537642 PCNX2A6NKB5 2137 aa15.13■□□□□ 0.01
USP28-204ENST00000537642 FAM47DPA6NHR8 397 aa15.13■□□□□ 0.01
USP28-204ENST00000537642 C10orf142B7Z368 130 aa15.13■□□□□ 0.01
USP28-204ENST00000537642 CBX4O00257 560 aa15.13■□□□□ 0.01
USP28-204ENST00000537642 PLK4O00444 970 aa15.13■□□□□ 0.01
USP28-204ENST00000537642 MCF2LO15068 1137 aa15.13■□□□□ 0.01
USP28-204ENST00000537642 ALOX15BO15296 676 aa15.13■□□□□ 0.01
USP28-204ENST00000537642 BNIP3LO60238 219 aa15.13■□□□□ 0.01
USP28-204ENST00000537642 PLXNA2O75051 1894 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms