RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ATF4P18848 351 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CYP7A1P22680 504 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 PROZP22891 400 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ATXN3P54252 364 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 SMARCB1Q12824 385 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 LAMC2Q13753 1193 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 GRM4Q14833 912 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 PUM3Q15397 648 aaKnown RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ZNF181Q2M3W8 571 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 FASTKD1Q53R41 847 aaKnown RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 PAGE2BQ5JRK9 111 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CCNYL2Q5T2Q4 361 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 INTS11Q5TA45 600 aaKnown RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CHSY3Q70JA7 882 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 MFSD4AQ8N468 514 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 PNMA1Q8ND90 353 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 HERVK_113Q902F9 699 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ADNPQ9H2P0 1102 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 TMEM206Q9H813 350 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 WDR41Q9HAD4 459 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 EFCAB1Q9HAE3 211 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 SPC25Q9HBM1 224 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 FBXO28Q9NVF7 368 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 WARS2Q9UGM6 360 aaKnown RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 FARP1Q9Y4F1 1045 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 DGKBQ9Y6T7 804 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ASTN1O14525 1302 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 TCRBV9S1A1TA0A576 114 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 MAGEB16A2A368 324 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ATP6V1G2-DDX39BF2Z307 99 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 H3BUI4 141 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 SGK1O00141 431 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC22A2O15244 555 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 UGT2B11O75310 529 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 BCAS1O75363 584 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ALDH1A2O94788 518 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 IFNB1P01574 187 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CYP2D6P10635 497 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 BMP1P13497 986 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC5A1P13866 664 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 IL12AP29459 219 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ETV1P50549 477 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 SLC13A2Q13183 592 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ALCAMQ13740 583 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 TRIM25Q14258 630 aaKnown RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 RFTN1Q14699 578 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CBWD6Q4V339 395 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ESCO2Q56NI9 601 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CBWD3Q5JTY5 395 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CBWD5Q5RIA9 395 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CLVS2Q5SYC1 327 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 FNBP1LQ5T0N5 605 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 IRAK1BP1Q5VVH5 260 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 KRT39Q6A163 491 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 GTF2IRD2BQ6EKJ0 949 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 C15orf52Q6ZUT6 534 aaKnown RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 GTF2IRD2Q86UP8 949 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 IFNL1Q8IU54 200 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ARHGEF19Q8IW93 802 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 SAMD14Q8IZD0 417 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 RNF148Q8N7C7 305 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CMASQ8NFW8 434 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 OR6F1Q8NGZ6 308 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 USP13Q92995 863 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 DUS3LQ96G46 650 aaKnown RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CEP170P1Q96L14 293 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ZNF778Q96MU6 729 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 TRIM15Q9C019 465 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 MTMR12Q9C0I1 747 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 JMJD4Q9H9V9 463 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ZNF277Q9NRM2 450 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 FARSBQ9NSD9 589 aaKnown RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ADPRHL2Q9NX46 363 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 M0R3G1 203 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 HDAC3O15379 428 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 PAPSS1O43252 624 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ABCB7O75027 752 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 UPK1BO75841 260 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ITGAVP06756 1048 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 PGK2P07205 417 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 TMEM191BP0C7N4 346 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 HOXB1P14653 301 aaPredicted RBP8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ETS1P14921 441 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CKMT2P17540 419 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ATF6P18850 670 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 LTKP29376 864 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 WEE1P30291 646 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 HTR2BP41595 481 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 CLCNKBP51801 687 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 BLVRAP53004 296 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 GPLD1P80108 840 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 BFSP1Q12934 665 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 NFIL3Q16649 462 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 TYSND1Q2T9J0 566 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ATAD3CQ5T2N8 411 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 STXBP5Q5T5C0 1151 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 TRAF7Q6Q0C0 670 aa8.67□□□□□ -1.02
SRGAP1-202ENST00000537556 ZSCAN18Q8TBC5 510 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms