RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 VPS28Q9UK41 221 aa8.69□□□□□ -1.02
USP28-203ENST00000537490 TBC1D30Q9Y2I9 924 aa8.69□□□□□ -1.02
USP28-203ENST00000537490 CFAP47Q6ZTR5 3102 aa8.69□□□□□ -1.02
USP28-203ENST00000537490 APC2O95996 2303 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 DRGXA6NNA5 263 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 K7ERQ8 282 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 RNF103O00237 685 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 SLC7A4O43246 635 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 PLRG1O43660 514 aaKnown RBP8.68□□□□□ -1.02
USP28-203ENST00000537490 BNIP3LO60238 219 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 SNAP91O60641 907 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 CTSLP07711 333 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 SRCP12931 536 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 ZNF18P17022 549 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 EPHA8P29322 1005 aaPredicted RBP8.68□□□□□ -1.02
USP28-203ENST00000537490 RXRGP48443 463 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 CXCR3P49682 368 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 SULT1E1P49888 294 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 CDH4P55283 916 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 TAS2R38P59533 333 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 UBE2HP62256 183 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 MTA1Q13330 715 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 MAN2A1Q16706 1144 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 TPD52L1Q16890 204 aaPredicted RBP8.68□□□□□ -1.02
USP28-203ENST00000537490 INAVAQ3KP66 663 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 VWA3BQ502W6 1294 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 SLC45A4Q5BKX6 768 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 MIIPQ5JXC2 388 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 ARTNQ5T4W7 220 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 FAM46CQ5VWP2 391 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 SMYD5Q6GMV2 418 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 KANSL1Q7Z3B3 1105 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 DSG4Q86SJ6 1040 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 MFSD2AQ8NA29 543 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 MLKLQ8NB16 471 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 NT5C3BQ969T7 300 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 TBCBQ99426 244 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 TKTL2Q9H0I9 626 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 MUC3BQ9H195 1237 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 KDM4CQ9H3R0 1056 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 NDST4Q9H3R1 872 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 WDCPQ9H6R7 721 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 SYNCQ9H7C4 482 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 ERVMER34-1Q9H9K5 563 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.68□□□□□ -1.02
USP28-203ENST00000537490 DKK4Q9UBT3 224 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 TPX2Q9ULW0 747 aaKnown RBP8.68□□□□□ -1.02
USP28-203ENST00000537490 CA5BQ9Y2D0 317 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 PCDHGA1Q9Y5H4 931 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 TMEM131Q92545 1883 aa8.68□□□□□ -1.02
USP28-203ENST00000537490 GOLGA4Q13439 2230 aaKnown RBP8.68□□□□□ -1.02
USP28-203ENST00000537490 A0A0D9SEW6 157 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 C1QTNF3-AMACRE9PGA6 284 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 ALOX15BO15296 676 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 YKT6O15498 198 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 SMAD6O43541 496 aaKnown RBP8.67□□□□□ -1.02
USP28-203ENST00000537490 PLXNA2O75051 1894 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 RHOCP08134 193 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 JUPP14923 745 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 CYP11B1P15538 503 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 PTPRBP23467 1997 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 RRM1P23921 792 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 CHRNA3P32297 505 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 CDH5P33151 784 aaPredicted RBP8.67□□□□□ -1.02
USP28-203ENST00000537490 GABRB2P47870 512 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 ARRB1P49407 418 aaPredicted RBP8.67□□□□□ -1.02
USP28-203ENST00000537490 ACADVLP49748 655 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 SNX16P57768 344 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 KRT83P78385 493 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 DEUP1Q05D60 604 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 STAT4Q14765 748 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 DRAP1Q14919 205 aaPredicted RBP8.67□□□□□ -1.02
USP28-203ENST00000537490 C2CD6Q53TS8 623 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 HSP90AA4PQ58FG1 418 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 BRMS1LQ5PSV4 323 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 PIP5KL1Q5T9C9 394 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 SFMBT2Q5VUG0 894 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 TRNP1Q6NT89 227 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 PDZD3Q86UT5 571 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 TMPRSS12Q86WS5 348 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 TRIM69Q86WT6 500 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 XYLT1Q86Y38 959 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 ZDHHC17Q8IUH5 632 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 PDCD7Q8N8D1 485 aaKnown RBP8.67□□□□□ -1.02
USP28-203ENST00000537490 ATP11CQ8NB49 1132 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 CHST14Q8NCH0 376 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 TMEM35BQ8NCS4 154 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 OR2A12Q8NGT7 310 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 TSC1Q92574 1164 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 KLK6Q92876 244 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 ARRDC3Q96B67 414 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 C18orf8Q96DM3 657 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 PGAP3Q96FM1 320 aaPredicted RBP8.67□□□□□ -1.02
USP28-203ENST00000537490 PDCL3Q9H2J4 239 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 CAAP1Q9H8G2 361 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 RRN3Q9NYV6 651 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 MPP6Q9NZW5 540 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 VPS51Q9UID3 782 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 STAP1Q9ULZ2 295 aa8.67□□□□□ -1.02
USP28-203ENST00000537490 DMTF1Q9Y222 760 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms