RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 SMIM35A0A1B0GVV1 85 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 ZNF263O14978 683 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 RAP2AP10114 183 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 HSPD1P10809 573 aaKnown RBP7.12□□□□□ -1.27
CCDC60-203ENST00000536742 MTHFD1P11586 935 aaKnown RBP7.12□□□□□ -1.27
CCDC60-203ENST00000536742 PCSK1P29120 753 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 GDI1P31150 447 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 HOXA9P31269 272 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 ALDH1A3P47895 512 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 HK3P52790 923 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 SEMG2Q02383 582 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 PRKD1Q15139 912 aaPredicted RBP7.12□□□□□ -1.27
CCDC60-203ENST00000536742 FAM214AQ32MH5 1076 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 HIST2H2BCQ6DN03 193 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 EFCAB12Q6NXP0 572 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 RALGPS2Q86X27 583 aaPredicted RBP7.12□□□□□ -1.27
CCDC60-203ENST00000536742 PALB2Q86YC2 1186 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 GRAMD1CQ8IYS0 662 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 RNF169Q8NCN4 708 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 DEPDC1BQ8WUY9 529 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 TFAP2CQ92754 450 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 FGF11Q92914 225 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 CDK5RAP3Q96JB5 506 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 MRI1Q9BV20 369 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 C11orf54Q9H0W9 315 aaPredicted RBP7.12□□□□□ -1.27
CCDC60-203ENST00000536742 WDCPQ9H6R7 721 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 PXMP2Q9NR77 195 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 ERAP1Q9NZ08 941 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 ST6GALNAC2Q9UJ37 374 aa7.12□□□□□ -1.27
CCDC60-203ENST00000536742 PDCD11Q14690 1871 aaKnown RBP7.12□□□□□ -1.27
CCDC60-203ENST00000536742 DOCK6Q96HP0 2047 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 SPTBN1Q01082 2364 aaKnown RBP7.11□□□□□ -1.27
CCDC60-203ENST00000536742 ZBED9Q6R2W3 1325 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 DIRC3C9JPN6 131 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 FTLP02792 175 aaPredicted RBP7.11□□□□□ -1.27
CCDC60-203ENST00000536742 CFIP05156 583 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 SLC16A2P36021 539 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 PI4KAP42356 2102 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 GLUD2P49448 558 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 MAN2A2P49641 1150 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 RALBP1Q15311 655 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 DUOXA1Q1HG43 343 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 CCDC96Q2M329 555 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 USH1GQ495M9 461 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 PABPC1LQ4VXU2 614 aaKnown RBP7.11□□□□□ -1.27
CCDC60-203ENST00000536742 SBK1Q52WX2 424 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 ARHGAP40Q5TG30 622 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 RABEPKQ7Z6M1 372 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 WDR75Q8IWA0 830 aaKnown RBP7.11□□□□□ -1.27
CCDC60-203ENST00000536742 ELOA2Q8IYF1 753 aaPredicted RBP7.11□□□□□ -1.27
CCDC60-203ENST00000536742 TTC8Q8TAM2 541 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 MTFMTQ96DP5 389 aaKnown RBP7.11□□□□□ -1.27
CCDC60-203ENST00000536742 MCRS1Q96EZ8 462 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 WWC2-AS2Q96NR7 200 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 DMRTA2Q96SC8 542 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 ADOQ96SZ5 270 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 GAD1Q99259 594 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 KLC2Q9H0B6 622 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 LDAHQ9H6V9 325 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 NRDE2Q9H7Z3 1164 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 ANLNQ9NQW6 1124 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCDC60-203ENST00000536742 COL20A1Q9P218 1284 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 GINS2Q9Y248 185 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 ACTL7AQ9Y615 435 aa7.11□□□□□ -1.27
CCDC60-203ENST00000536742 ABCA7Q8IZY2 2146 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 PLIN4Q96Q06 1357 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 F8P00451 2351 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 OTOGQ6ZRI0 2925 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 A0A0U1RQF3 1178 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 C1QTNF3-AMACRE9PGA6 284 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 MUSKO15146 869 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 APBB3O95704 486 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 POMCP01189 267 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 ALDH2P05091 517 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 SERPINF2P08697 491 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 TSPY3P0CV98 308 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 TSPY8P0CW00 308 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 MYCLP12524 364 aaPredicted RBP7.1□□□□□ -1.27
CCDC60-203ENST00000536742 FPR1P21462 350 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 ACRV1P26436 265 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 SMARCA1P28370 1054 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 GBX1Q14549 363 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 SMAD1Q15797 465 aaKnown RBP7.1□□□□□ -1.27
CCDC60-203ENST00000536742 SPDYCQ5MJ68 293 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 PPM1LQ5SGD2 360 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 ATXN7L2Q5T6C5 722 aaPredicted RBP7.1□□□□□ -1.27
CCDC60-203ENST00000536742 LIN9Q5TKA1 542 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 LPCAT2Q7L5N7 544 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 MARCH9Q86YJ5 346 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 GPR65Q8IYL9 337 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 ZNF808Q8N4W9 903 aaPredicted RBP7.1□□□□□ -1.27
CCDC60-203ENST00000536742 IL17RDQ8NFM7 739 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 SNRNP27Q8WVK2 155 aaKnown RBP7.1□□□□□ -1.27
CCDC60-203ENST00000536742 MOCOSQ96EN8 888 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 LRGUKQ96M69 825 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 HERC2P3Q9BVR0 1158 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 FZD8Q9H461 694 aa7.1□□□□□ -1.27
CCDC60-203ENST00000536742 FNIP2Q9P278 1114 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms