RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PARD3BQ8TEW8 1205 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 USP6NLQ92738 828 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 BADQ92934 168 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 COLEC11Q9BWP8 271 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 CHMP4AQ9BY43 222 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 PDGFCQ9NRA1 345 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 MORF4L1Q9UBU8 362 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 TNFRSF18Q9Y5U5 241 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 LRRFIP2Q9Y608 721 aaKnown RBP6.17□□□□□ -1.42
CLIP1-207ENST00000536634 CACNA1AO00555 2505 aa6.17□□□□□ -1.42
CLIP1-207ENST00000536634 SIPA1L1O43166 1804 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 ANO9A1A5B4 782 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 PPP6CO00743 305 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 MT-CO3P00414 261 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 CHRM5P08912 532 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-207ENST00000536634 PRR35P0CG20 571 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 CD19P15391 556 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 ITGB8P26012 769 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 TBX4P57082 545 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 CLCA4Q14CN2 919 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 SRSF7Q16629 238 aaKnown RBP eCLIP6.16□□□□□ -1.42
CLIP1-207ENST00000536634 LONRF1Q17RB8 773 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 GRHL2Q6ISB3 625 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 HIBCHQ6NVY1 386 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-207ENST00000536634 YTHDF3Q7Z739 585 aaKnown RBP6.16□□□□□ -1.42
CLIP1-207ENST00000536634 FSTL5Q8N475 847 aaPredicted RBP6.16□□□□□ -1.42
CLIP1-207ENST00000536634 EDC3Q96F86 508 aaKnown RBP6.16□□□□□ -1.42
CLIP1-207ENST00000536634 IDI2Q9BXS1 227 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 PORCNQ9H237 461 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 BICC1Q9H694 974 aaKnown RBP6.16□□□□□ -1.42
CLIP1-207ENST00000536634 STARD7Q9NQZ5 370 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 KIF16BQ96L93 1317 aa6.16□□□□□ -1.42
CLIP1-207ENST00000536634 WDR91A4D1P6 747 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 PRC1O43663 620 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 CAND2O75155 1236 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 ENTPD3O75355 529 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 GCATO75600 419 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 USP1O94782 785 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 NDST3O95803 873 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 TUBB4AP04350 444 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 NBPF7P0C2Y1 421 aaPredicted RBP6.15□□□□□ -1.42
CLIP1-207ENST00000536634 HARSP12081 509 aaKnown RBP6.15□□□□□ -1.42
CLIP1-207ENST00000536634 MYL4P12829 197 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 ATF7P17544 494 aaPredicted RBP6.15□□□□□ -1.42
CLIP1-207ENST00000536634 TNFSF4P23510 183 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 ADRA1DP25100 572 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 CERS1P27544 350 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 MTAPQ13126 283 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 PICALMQ13492 652 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 LARS2Q15031 903 aaKnown RBP6.15□□□□□ -1.42
CLIP1-207ENST00000536634 PUM3Q15397 648 aaKnown RBP6.15□□□□□ -1.42
CLIP1-207ENST00000536634 ST3GAL2Q16842 350 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 SHROOM1Q2M3G4 852 aaPredicted RBP6.15□□□□□ -1.42
CLIP1-207ENST00000536634 TRIM60Q495X7 471 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 CERKLQ49MI3 558 aaPredicted RBP6.15□□□□□ -1.42
CLIP1-207ENST00000536634 KIAA1614Q5VZ46 1190 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 DENND2CQ68D51 928 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 ZNF626Q68DY1 528 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 IL31Q6EBC2 164 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 ABLIM2Q6H8Q1 611 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 KIAA0408Q6ZU52 694 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 GPR142Q7Z601 462 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 NEK8Q86SG6 692 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 ANKRD44Q8N8A2 993 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 TRPV1Q8NER1 839 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 ADAMTS18Q8TE60 1221 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 PPM1EQ8WY54 764 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 CCDC136Q96JN2 1154 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 ZC3H10Q96K80 434 aaKnown RBP6.15□□□□□ -1.42
CLIP1-207ENST00000536634 CCDC17Q96LX7 622 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 FYTTD1Q96QD9 318 aaKnown RBP6.15□□□□□ -1.42
CLIP1-207ENST00000536634 MAGEB5Q9BZ81 275 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 SEMA4CQ9C0C4 833 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 ARNT2Q9HBZ2 717 aa6.15□□□□□ -1.42
CLIP1-207ENST00000536634 C9orf78Q9NZ63 289 aaPredicted RBP6.15□□□□□ -1.42
CLIP1-207ENST00000536634 GAKO14976 1311 aa6.15□□□□□ -1.43
CLIP1-207ENST00000536634 BRWD1Q9NSI6 2320 aa6.15□□□□□ -1.43
CLIP1-207ENST00000536634 PLXNA1Q9UIW2 1896 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 VPS13AQ96RL7 3174 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 DNM1LO00429 736 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 PRAMEF2O60811 474 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 WDR47O94967 919 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 IFIT1P09914 478 aaKnown RBP6.14□□□□□ -1.43
CLIP1-207ENST00000536634 TMEM225BP0DP42 221 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 GABRB3P28472 473 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 RGS2P41220 211 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 NEK3P51956 506 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 SSBP2P81877 361 aaPredicted RBP6.14□□□□□ -1.43
CLIP1-207ENST00000536634 GPS1Q13098 491 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 RABL6Q3YEC7 729 aaPredicted RBP6.14□□□□□ -1.43
CLIP1-207ENST00000536634 MTX3Q5HYI7 312 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 FAM209BQ5JX69 171 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 RAP1GAP2Q684P5 730 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 SLC18B1Q6NT16 456 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 BEND5Q7L4P6 421 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 CCDC28AQ8IWP9 274 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 PNPLA1Q8N8W4 532 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 GPRC5AQ8NFJ5 357 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 SUN3Q8TAQ9 357 aa6.14□□□□□ -1.43
CLIP1-207ENST00000536634 LPAR1Q92633 364 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms