RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 WDCPQ9H6R7 721 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 SGK2Q9HBY8 427 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 AIPL1Q9NZN9 384 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 STIM2Q9P246 746 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 HS3ST4Q9Y661 456 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 PTPRBP23467 1997 aa12.81□□□□□ -0.36
PRKDC-207ENST00000536483 URB1O60287 2271 aaKnown RBP12.8□□□□□ -0.36
PRKDC-207ENST00000536483 MUC22E2RYF6 1773 aaPredicted RBP12.8□□□□□ -0.36
PRKDC-207ENST00000536483 FAM47DPA6NHR8 397 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 C2CD4BA6NLJ0 364 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 CLDN11O75508 207 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 ADCY5O95622 1261 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 CSKP41240 450 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 GRK6P43250 576 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 PTPN9P43378 593 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 CCT8P50990 548 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 IL9RQ01113 521 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 NRG1Q02297 640 aaPredicted RBP12.8□□□□□ -0.36
PRKDC-207ENST00000536483 SULT2A1Q06520 285 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
PRKDC-207ENST00000536483 HNRNPA1L2Q32P51 320 aaKnown RBP12.8□□□□□ -0.36
PRKDC-207ENST00000536483 FILIP1LQ4L180 1135 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 CCDC157Q569K6 752 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 PITRM1Q5JRX3 1037 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 ZNF776Q68DI1 518 aaPredicted RBP12.8□□□□□ -0.36
PRKDC-207ENST00000536483 CXorf57Q6NSI4 855 aaKnown RBP12.8□□□□□ -0.36
PRKDC-207ENST00000536483 PPP1R2P3Q6NXS1 205 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 MMS22LQ6ZRQ5 1243 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 ADAT2Q7Z6V5 191 aaKnown RBP12.8□□□□□ -0.36
PRKDC-207ENST00000536483 CCAR2Q8N163 923 aaKnown RBP12.8□□□□□ -0.36
PRKDC-207ENST00000536483 CARNMT1Q8N4J0 409 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 GANCQ8TET4 914 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 RNF34Q969K3 372 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 IGSF8Q969P0 613 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 VCPIP1Q96JH7 1222 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 NAP1L5Q96NT1 182 aaPredicted RBP12.8□□□□□ -0.36
PRKDC-207ENST00000536483 TBCBQ99426 244 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 AGPAT1Q99943 283 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 TTYH3Q9C0H2 523 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 ANLNQ9NQW6 1124 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 NCKAP1Q9Y2A7 1128 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 OR51B4Q9Y5P0 310 aa12.8□□□□□ -0.36
PRKDC-207ENST00000536483 CXorf51AA0A1B0GTR3 108 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 TARSL2A2RTX5 802 aaKnown RBP12.79□□□□□ -0.36
PRKDC-207ENST00000536483 FAM149AA5PLN7 773 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 TRABD2BA6NFA1 517 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 SIGLEC16A6NMB1 481 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 C10orf142B7Z368 130 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 TNFSF14O43557 240 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 PCDHGA12O60330 932 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 SIN3BO75182 1162 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 MOCS3O95396 460 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 CALB1P05937 261 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 IGHV4-34P06331 123 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 PRKCIP41743 596 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 CTSKP43235 329 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 SULT1E1P49888 294 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 CDH4P55283 916 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 RNASE9P60153 205 aaKnown RBP12.79□□□□□ -0.36
PRKDC-207ENST00000536483 ST8SIA6P61647 398 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 DEUP1Q05D60 604 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 CYP4F3Q08477 520 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 NME3Q13232 169 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 SOWAHCQ53LP3 525 aaPredicted RBP12.79□□□□□ -0.36
PRKDC-207ENST00000536483 C2CD6Q53TS8 623 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 PRAMEF14Q5SWL7 426 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 KIAA0895LQ68EN5 471 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 SND1Q7KZF4 910 aaKnown RBP eCLIP12.79□□□□□ -0.364e-9■■■□□ 18.4
PRKDC-207ENST00000536483 MON1BQ7L1V2 547 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 STRADAQ7RTN6 431 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 C14orf80Q86SX3 495 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 GALNT15Q8N3T1 639 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 C3orf20Q8ND61 904 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 PCMTD1Q96MG8 357 aaPredicted RBP12.79□□□□□ -0.36
PRKDC-207ENST00000536483 TKTL2Q9H0I9 626 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 RSPH9Q9H1X1 276 aaPredicted RBP12.79□□□□□ -0.36
PRKDC-207ENST00000536483 PABPC3Q9H361 631 aaKnown RBP12.79□□□□□ -0.36
PRKDC-207ENST00000536483 FBXL12Q9NXK8 326 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 ADAM22Q9P0K1 906 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 SERGEFQ9UGK8 458 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 ERVW-1Q9UQF0 538 aa12.79□□□□□ -0.36
PRKDC-207ENST00000536483 TMEM131Q92545 1883 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 A0A1W2PPC4 97 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 SYCE3A1L190 88 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 PBX1P40424 430 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 NSFP46459 744 aaKnown RBP12.78□□□□□ -0.36
PRKDC-207ENST00000536483 GALCP54803 685 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 C21orf59P57076 290 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 ECT2LQ008S8 904 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 CAMK2BQ13554 666 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 SMAD1Q15797 465 aaKnown RBP12.78□□□□□ -0.36
PRKDC-207ENST00000536483 CCDC14Q49A88 953 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 PPP1R15BQ5SWA1 713 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 C9orf64Q5T6V5 341 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 DHRS13Q6UX07 377 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 USP30Q70CQ3 517 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 SETD3Q86TU7 594 aaPredicted RBP12.78□□□□□ -0.36
PRKDC-207ENST00000536483 APCDD1Q8J025 514 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 SLC30A5Q8TAD4 765 aa12.78□□□□□ -0.36
PRKDC-207ENST00000536483 LRIG1Q96JA1 1093 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms