RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 PQLC3Q8N755 202 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 PLD5Q8N7P1 536 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 CCDC26Q8TAB7 109 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 SH3RF2Q8TEC5 729 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 GRK7Q8WTQ7 553 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 ATP2A3Q93084 1043 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 FAM83CQ9BQN1 747 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 HEMGNQ9BXL5 484 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 SEMA4GQ9NTN9 838 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 SMPD4Q9NXE4 827 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 CFAP97Q9P2B7 532 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 RAB21Q9UL25 225 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 DRG1Q9Y295 367 aaKnown RBP11.07□□□□□ -0.64
UBE3B-205ENST00000535900 KIAA1549LQ6ZVL6 1849 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 ZNF292O60281 2723 aa11.07□□□□□ -0.64
UBE3B-205ENST00000535900 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 CFAP69A5D8W1 941 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 HACD1B0YJ81 288 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 FAM72CH0Y354 149 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 GFRA2O00451 464 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 MCF2LO15068 1137 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 HRO43593 1189 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 PHF2O75151 1096 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 CLDN11O75508 207 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 EGFP01133 1207 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 KRT10P13645 584 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 ERCC2P18074 760 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 ETFBP38117 255 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 PXNP49023 591 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 NDST2P52849 883 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 CDH4P55283 916 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 MMRN1Q13201 1228 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 DHX34Q14147 1143 aaKnown RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 PDK1Q15118 436 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 SIX1Q15475 284 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 ZNF77Q15935 545 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 CSRP2Q16527 193 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 AASDHQ4L235 1098 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 FAM133BQ5BKY9 247 aaKnown RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 FAM72AQ5TYM5 149 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 FAM72DQ6L9T8 149 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 RWDD4Q6NW29 188 aaKnown RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 FBXL22Q6P050 247 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 AADACL2Q6P093 401 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 PKN3Q6P5Z2 889 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 ZNF783Q6ZMS7 281 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 SYDE1Q6ZW31 735 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 FAM72BQ86X60 149 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 UMODL1-AS1Q8N2C9 162 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 FAM160A2Q8N612 972 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 RTL3Q8N8U3 475 aaKnown RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 PRELID2Q8N945 189 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 NOA1Q8NC60 698 aaKnown RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 HJURPQ8NCD3 748 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 LRRN4CLQ8ND94 238 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 RIN3Q8TB24 985 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 CCHCR1Q8TD31 782 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 OSCP1Q8WVF1 389 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 ANKRD7Q92527 254 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 SLCO2A1Q92959 643 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 MAGOHBQ96A72 148 aaKnown RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 RPRD1AQ96P16 312 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 P2RY13Q9BPV8 354 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 ARGLU1Q9NWB6 273 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 TMEM248Q9NWD8 314 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 DUS2Q9NX74 493 aaKnown RBP11.06□□□□□ -0.64
UBE3B-205ENST00000535900 PCYOX1Q9UHG3 505 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 WNT6Q9Y6F9 365 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 CACNA1AO00555 2505 aa11.06□□□□□ -0.64
UBE3B-205ENST00000535900 A0A1B0GVM2 712 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 DCDC2BA2VCK2 349 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 CCDC151A5D8V7 595 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 TCAF2A6NFQ2 919 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 OTOL1A6NHN0 477 aaPredicted RBP11.05□□□□□ -0.64
UBE3B-205ENST00000535900 TRDMT1O14717 391 aaKnown RBP11.05□□□□□ -0.64
UBE3B-205ENST00000535900 PPP1R12AO14974 1030 aaPredicted RBP11.05□□□□□ -0.64
UBE3B-205ENST00000535900 MTSS1O43312 755 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 FOXD2O60548 495 aaPredicted RBP11.05□□□□□ -0.64
UBE3B-205ENST00000535900 RPP40O75818 363 aaKnown RBP11.05□□□□□ -0.64
UBE3B-205ENST00000535900 GAS8O95995 478 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 CYBBP04839 570 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 ITGAVP06756 1048 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 IRF1P10914 325 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 DRD1P21728 446 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 TGM1P22735 817 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 AMPD1P23109 780 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 TNFRSF8P28908 595 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 HOXA6P31267 233 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 STIP1P31948 543 aaKnown RBP11.05□□□□□ -0.64
UBE3B-205ENST00000535900 GJA4P35212 333 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 YBEYP58557 167 aaPredicted RBP11.05□□□□□ -0.64
UBE3B-205ENST00000535900 BYSLQ13895 437 aaKnown RBP11.05□□□□□ -0.64
UBE3B-205ENST00000535900 BRD3Q15059 726 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 NOMO1Q15155 1222 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 ELF2Q15723 593 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 FBXO43Q4G163 708 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 MPPE1Q53F39 396 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 RAP1GAP2Q684P5 730 aa11.05□□□□□ -0.64
UBE3B-205ENST00000535900 RNF43Q68DV7 783 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms