RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SORT1Q99523 831 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 COQ10BQ9H8M1 238 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 CYP3A43Q9HB55 503 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 XPR1Q9UBH6 696 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 CLDN5O00501 218 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 MYL4P12829 197 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 CYP3A5P20815 502 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 HMGB2P26583 209 aaKnown RBP16.19■□□□□ 0.18
MCF2L-232ENST00000535094 MTTPP55157 894 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 PITX1P78337 314 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-232ENST00000535094 PLIN5Q00G26 463 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 ZNF567Q8N184 647 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 PNPLA1Q8N8W4 532 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 FAM47BQ8NA70 645 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 EDEM1Q92611 657 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 C18orf25Q96B23 403 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-232ENST00000535094 TMIGD2Q96BF3 282 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 RMND5BQ96G75 393 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-232ENST00000535094 ZFRQ96KR1 1074 aaKnown RBP16.19■□□□□ 0.18
MCF2L-232ENST00000535094 PCDHB12Q9Y5F1 795 aa16.19■□□□□ 0.18
MCF2L-232ENST00000535094 ZNF286BP0CG31 522 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 ARRB2P32121 409 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 ADGRE1Q14246 886 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 SLC10A6Q3KNW5 377 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 EGFL7Q9UHF1 273 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 TMCO1Q9UM00 188 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 CSADQ9Y600 493 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 SBF2Q86WG5 1849 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 GCATO75600 419 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 MT-ND1P03886 318 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 ARF4P18085 180 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-232ENST00000535094 PPARGP37231 505 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-232ENST00000535094 PSME3P61289 254 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 PHEXP78562 749 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 GRM3Q14832 879 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 LCLAT1Q6UWP7 414 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 DDIASQ8IXT1 998 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 DDI1Q8WTU0 396 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 PDGFDQ9GZP0 370 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-232ENST00000535094 PTTG2Q9NZH5 202 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 ACOT9Q9Y305 439 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
MCF2L-232ENST00000535094 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-232ENST00000535094 TPSB2P20231 275 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 GRIA3P42263 894 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 NR1H2P55055 460 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 ATP1A4Q13733 1029 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 CEACAM7Q14002 265 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 TPSAB1Q15661 275 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 CCDC142Q17RM4 750 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 TBC1D25Q3MII6 688 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 BTBD9Q96Q07 612 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 NAT9Q9BTE0 207 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 RRN3Q9NYV6 651 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 TSR3Q9UJK0 312 aaKnown RBP16.18■□□□□ 0.18
MCF2L-232ENST00000535094 SNX10Q9Y5X0 201 aa16.18■□□□□ 0.18
MCF2L-232ENST00000535094 TFAP2AP05549 437 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 NCAM1P13591 858 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 ARSAP15289 507 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 NEDD8Q15843 81 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 UGT2A3Q6UWM9 527 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 C4orf22Q6V702 233 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 AGBL3Q8NEM8 1001 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 FSD1LQ9BXM9 530 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 NIFKQ9BYG3 293 aaKnown RBP16.17■□□□□ 0.18
MCF2L-232ENST00000535094 MRPS26Q9BYN8 205 aaKnown RBP16.17■□□□□ 0.18
MCF2L-232ENST00000535094 DDIT4Q9NX09 232 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 ARHGEF38Q9NXL2 777 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 ZDHHC2Q9UIJ5 367 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 COL16A1Q07092 1604 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-232ENST00000535094 ATP6V1G1O75348 118 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 SUPT7LO94864 414 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 ATG7O95352 703 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 MOCS2O96007 188 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-232ENST00000535094 PTPN1P18031 435 aaKnown RBP16.17■□□□□ 0.18
MCF2L-232ENST00000535094 NR2C2P49116 596 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 PRKAA1Q13131 559 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 FUT11Q495W5 492 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 FCRL3Q96P31 734 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-232ENST00000535094 STAP1Q9ULZ2 295 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 DDHD2O94830 711 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 CDKL1Q00532 357 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 GPR141Q7Z602 305 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 ACVR1CQ8NER5 493 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 GBA2Q9HCG7 927 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-232ENST00000535094 PDGFCQ9NRA1 345 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 WARS2Q9UGM6 360 aaKnown RBP16.17■□□□□ 0.18
MCF2L-232ENST00000535094 MYRFQ9Y2G1 1151 aa16.17■□□□□ 0.18
MCF2L-232ENST00000535094 TIMM13Q9Y5L4 95 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-232ENST00000535094 TIMM44O43615 452 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 ZBTB7AO95365 584 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 ARIH2O95376 493 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 TFPTP0C1Z6 253 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 HSPA8P11142 646 aaKnown RBP16.16■□□□□ 0.18
MCF2L-232ENST00000535094 NFKB1P19838 968 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 CCR3P51677 355 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 FASTKQ14296 549 aaKnown RBP16.16■□□□□ 0.18
MCF2L-232ENST00000535094 FAM83EQ2M2I3 478 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 ANO4Q32M45 955 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 SLC44A4Q53GD3 710 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms