RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	ACKR2	O00590	384 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	NCAM2	O15394	837 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SUV39H1	O43463	412 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TLX3	O43711	291 aa	Predicted RBP	5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SH3BP5	O60239	455 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	N4BP1	O75113	896 aa	Known RBP	5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ASNS	P08243	561 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CHRM3	P20309	590 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CFP	P27918	469 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SERPINF1	P36955	418 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CCR3	P51677	355 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ITGA8	P53708	1063 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SATB1	Q01826	763 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	NHLH2	Q02577	135 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	POU5F1B	Q06416	359 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PTK2B	Q14289	1009 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SLC29A2	Q14542	456 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ZIK1	Q3SY52	487 aa	Predicted RBP	5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PLA1A	Q53H76	456 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	AGAP9	Q5VTM2	703 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PLPP4	Q5VZY2	271 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TSHZ3	Q63HK5	1081 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PLAG1	Q6DJT9	500 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TAPT1	Q6NXT6	567 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TAF2	Q6P1X5	1199 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	NFRKB	Q6P4R8	1299 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FBXO38	Q6PIJ6	1188 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TMED8	Q6PL24	325 aa	Predicted RBP	5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	KCTD20	Q7Z5Y7	419 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ZNF280B	Q86YH2	543 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	RHOT2	Q8IXI1	618 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FAM133A	Q8N9E0	248 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	POC1B	Q8TC44	478 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	STYX	Q8WUJ0	223 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TRAPPC12	Q8WVT3	735 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MIEF2	Q96C03	454 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CTAGE1	Q96RT6	745 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TRIB1	Q96RU8	372 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TTYH3	Q9C0H2	523 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	UBA5	Q9GZZ9	404 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DHX36	Q9H2U1	1008 aa	Known RBP	5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	RPAP3	Q9H6T3	665 aa	Predicted RBP	5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	NECTIN3	Q9NQS3	549 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DACT1	Q9NYF0	836 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	LRFN1	Q9P244	771 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CTTNBP2NL	Q9P2B4	639 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ZFR2	Q9UPR6	939 aa	Known RBP	5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ADAMTS9	Q9P2N4	1935 aa		5.05	□□□□□ -1.6
ECHDC1-223	ENST00000534442	RTTN	Q86VV8	2226 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MCM3AP	O60318	1980 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442		A1L4Q6	167 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	NPEPPSL1	A6NEC2	478 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442		M0R3H8	397 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	GPR42	O15529	346 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CAVIN2	O95810	425 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DHRS4L1	P0CG22	281 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	XRCC6	P12956	609 aa	Known RBP eCLIP	5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CCT5	P48643	541 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CPT1A	P50416	773 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ZNF134	P52741	427 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FOXO1	Q12778	655 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FZD5	Q13467	585 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ARHGEF7	Q14155	803 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	IQCB1	Q15051	598 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	POSTN	Q15063	836 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ARHGAP15	Q53QZ3	475 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	RAP1GAP2	Q684P5	730 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	NAIF1	Q69YI7	327 aa	Predicted RBP	5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	JMJD6	Q6NYC1	403 aa	Predicted RBP	5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CRTC1	Q6UUV9	634 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SLC30A10	Q6XR72	485 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442		Q6ZSN1	163 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	HTR3D	Q70Z44	454 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CACNA2D4	Q7Z3S7	1137 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442		Q8NA96	180 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CCDC150	Q8NCX0	1101 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PSD4	Q8NDX1	1056 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	FAM71B	Q8TC56	605 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PNISR	Q8TF01	805 aa	Known RBP	5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ZNF483	Q8TF39	744 aa	Predicted RBP	5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	AFG1L	Q8WV93	481 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PPP1R9B	Q96SB3	815 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SMO	Q99835	787 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SORBS1	Q9BX66	1292 aa	Known RBP	5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	5.04	□□□□□ -1.6	5e-9	■■■■■ 28.9
ECHDC1-223	ENST00000534442	TMEM8A	Q9HCN3	771 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DNMT3B	Q9UBC3	853 aa	Known RBP	5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	DKK3	Q9UBP4	350 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	GTF2A1L	Q9UNN4	478 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	SIPA1L1	O43166	1804 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PTPRB	P23467	1997 aa		5.04	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MYH3	P11055	1940 aa		5.03	□□□□□ -1.6
ECHDC1-223	ENST00000534442	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		5.03	□□□□□ -1.6
ECHDC1-223	ENST00000534442	HIDE1	A8MVS5	230 aa		5.03	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TRIM38	O00635	465 aa		5.03	□□□□□ -1.6
ECHDC1-223	ENST00000534442	PIP5K1B	O14986	540 aa		5.03	□□□□□ -1.6
ECHDC1-223	ENST00000534442	ZNF185	O15231	689 aa		5.03	□□□□□ -1.6
ECHDC1-223	ENST00000534442	CCP110	O43303	1012 aa		5.03	□□□□□ -1.6
ECHDC1-223	ENST00000534442	TNFRSF6B	O95407	300 aa		5.03	□□□□□ -1.6

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