RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 TP53INP2Q8IXH6 220 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 PIAS4Q8N2W9 510 aaPredicted RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 HDDC3Q8N4P3 179 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 SH2D3CQ8N5H7 860 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 GANCQ8TET4 914 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 ARRDC3Q96B67 414 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 SPAG5Q96R06 1193 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 DDX50Q9BQ39 737 aaKnown RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 NUSAP1Q9BXS6 441 aaKnown RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 TTYH3Q9C0H2 523 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 SEPT11Q9NVA2 429 aaKnown RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 ADAM22Q9P0K1 906 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 VPS28Q9UK41 221 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 RALYQ9UKM9 306 aaKnown RBP9.89□□□□□ -0.83
SSBP3-215ENST00000533946 PLXNB3Q9ULL4 1909 aa9.89□□□□□ -0.83
SSBP3-215ENST00000533946 CACNA1BQ00975 2339 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-215ENST00000533946 EDDM13A0A1B0GTR0 161 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 DDX3XO00571 662 aaKnown RBP eCLIP9.88□□□□□ -0.83
SSBP3-215ENST00000533946 NPC1O15118 1278 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 BCAT2O15382 392 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-215ENST00000533946 ATP9BO43861 1147 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 MBD3O95983 291 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 IL1BP01584 269 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 DNTTP04053 509 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 RHOCP08134 193 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 SRPRAP08240 638 aaKnown RBP9.88□□□□□ -0.83
SSBP3-215ENST00000533946 ITIH2P19823 946 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 MAT2AP31153 395 aaKnown RBP9.88□□□□□ -0.83
SSBP3-215ENST00000533946 ADRA1BP35368 520 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 CDH4P55283 916 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 FOXC1Q12948 553 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 ZNF177Q13360 481 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-215ENST00000533946 ARID5BQ14865 1188 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 NR1I3Q14994 352 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 SHBQ15464 509 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 HLA-BQ31612 363 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 ACCSLQ4AC99 568 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 RABGAP1LQ5R372 815 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 NYAP1Q6ZVC0 841 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 SLCO6A1Q86UG4 719 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 NLRP14Q86W24 1093 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 PHF13Q86YI8 300 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-215ENST00000533946 CADM4Q8NFZ8 388 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 OR2A12Q8NGT7 310 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 OR6K2Q8NGY2 324 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 FAM172AQ8WUF8 416 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 CENPIQ92674 756 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-215ENST00000533946 FUBP1Q96AE4 644 aaKnown RBP9.88□□□□□ -0.83
SSBP3-215ENST00000533946 NSMCE3Q96MG7 304 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 PEBP4Q96S96 227 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 MYOCQ99972 504 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 SPON2Q9BUD6 331 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 MUC3BQ9H195 1237 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 ARHGAP20Q9P2F6 1191 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 SUN2Q9UH99 717 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 DNAI1Q9UI46 699 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 FCF1Q9Y324 198 aaKnown RBP9.88□□□□□ -0.83
SSBP3-215ENST00000533946 MFHAS1Q9Y4C4 1052 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 ARID1BQ8NFD5 2236 aaPredicted RBP9.88□□□□□ -0.83
SSBP3-215ENST00000533946 LOC400499M0QZD8 3231 aa9.88□□□□□ -0.83
SSBP3-215ENST00000533946 TDRD6O60522 2096 aaKnown RBP9.87□□□□□ -0.83
SSBP3-215ENST00000533946 A0A1B0GTH6 734 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 A0A1B0GTW7 788 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 C1QTNF9BB2RNN3 333 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 H0Y8X5 98 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 ZBTB24O43167 697 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-215ENST00000533946 HYAL3O43820 417 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-215ENST00000533946 CLDN11O75508 207 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 LRIG2O94898 1065 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 ASLP04424 464 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 C1QTNF9P0C862 333 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 SLC2A3P11169 496 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 SDHBP21912 280 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 OXTRP30559 389 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 RDXP35241 583 aaKnown RBP9.87□□□□□ -0.83
SSBP3-215ENST00000533946 SCNN1AP37088 669 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 ZNF165P49910 485 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 ADPRHP54922 357 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 ST8SIA6P61647 398 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 FOXK2Q01167 660 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 LRRC73Q5JTD7 316 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 BRMS1LQ5PSV4 323 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 AGBL4Q5VU57 503 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 KIAA0895LQ68EN5 471 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 CYP4V2Q6ZWL3 525 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-215ENST00000533946 GATAD2AQ86YP4 633 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 ZDHHC17Q8IUH5 632 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 MCOLN2Q8IZK6 566 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 OR14C36Q8NHC7 312 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 C1orf74Q96LT6 269 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 MCEEQ96PE7 176 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 TRIM62Q9BVG3 475 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 IRX2Q9BZI1 471 aaPredicted RBP9.87□□□□□ -0.83
SSBP3-215ENST00000533946 BTBD1Q9H0C5 482 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 HAUS4Q9H6D7 363 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 GAREM1Q9H706 876 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 FZD3Q9NPG1 666 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 OR12D3Q9UGF7 316 aa9.87□□□□□ -0.83
SSBP3-215ENST00000533946 SLC12A6Q9UHW9 1150 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms