RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 IFNKQ9P0W0 207 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 STAP1Q9ULZ2 295 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 TBC1D30Q9Y2I9 924 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 PCDHB9Q9Y5E1 797 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 DOCK9Q9BZ29 2069 aa11.63□□□□□ -0.55
CLCF1-202ENST00000533438 IGSF10Q6WRI0 2623 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 KNL1Q8NG31 2342 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 CHD5Q8TDI0 1954 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.62□□□□□ -0.55
CLCF1-202ENST00000533438 FAM47DPA6NHR8 397 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 LRRC72A6NJI9 287 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 PES1O00541 588 aaKnown RBP11.62□□□□□ -0.55
CLCF1-202ENST00000533438 FLRT2O43155 660 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 ATP9BO43861 1147 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 CNTN5O94779 1100 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 LSM8O95777 96 aaKnown RBP11.62□□□□□ -0.55
CLCF1-202ENST00000533438 TPM3P06753 285 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 FTH1P19P0C7X4 201 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 GOT1P17174 413 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 RDXP35241 583 aaKnown RBP11.62□□□□□ -0.55
CLCF1-202ENST00000533438 CTSKP43235 329 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 PSMD8P48556 350 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 SULT1E1P49888 294 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 ZNF75DP51815 510 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 METAP1P53582 386 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 ADPRHP54922 357 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 CDH4P55283 916 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 RNASE9P60153 205 aaKnown RBP11.62□□□□□ -0.55
CLCF1-202ENST00000533438 NOMO3P69849 1222 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 ZNF177Q13360 481 aaPredicted RBP11.62□□□□□ -0.55
CLCF1-202ENST00000533438 FAM102AQ5T9C2 384 aaPredicted RBP11.62□□□□□ -0.55
CLCF1-202ENST00000533438 TAF3Q5VWG9 929 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 TRNP1Q6NT89 227 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 SND1Q7KZF4 910 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLCF1-202ENST00000533438 ERICH1Q86X53 443 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 PROSER1Q86XN7 944 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 ADAMTS14Q8WXS8 1223 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 MRFAP1L1Q96HT8 127 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 PPP1R9BQ96SB3 815 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 TBCBQ99426 244 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 XPO4Q9C0E2 1151 aaKnown RBP11.62□□□□□ -0.55
CLCF1-202ENST00000533438 TKTL2Q9H0I9 626 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 VPS16Q9H269 839 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 PDCL3Q9H2J4 239 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 TMEM51Q9NW97 253 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 TOR4AQ9NXH8 423 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 SLC25A13Q9UJS0 675 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 TMEM59LQ9UK28 342 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 SMG1Q96Q15 3661 aaKnown RBP11.62□□□□□ -0.55
CLCF1-202ENST00000533438 COL5A1P20908 1838 aaPredicted RBP11.62□□□□□ -0.55
CLCF1-202ENST00000533438 CABIN1Q9Y6J0 2220 aa11.62□□□□□ -0.55
CLCF1-202ENST00000533438 IGLV3-10A0A075B6K4 115 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 DRGXA6NNA5 263 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 VILLO15195 856 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 DKK1O94907 266 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 F9P00740 461 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 IL1BP01584 269 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 WNT1P04628 370 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 MMEP08473 750 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 FLT3P36888 993 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 PBX1P40424 430 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 CCR5P51681 352 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 DEUP1Q05D60 604 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 SLC25A52Q3SY17 297 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 ALFQ53S48 1182 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 C2CD6Q53TS8 623 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 FKBP15Q5T1M5 1219 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 ARCQ7LC44 396 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 SLCO6A1Q86UG4 719 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 SH2D3CQ8N5H7 860 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 OR14C36Q8NHC7 312 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 SETD7Q8WTS6 366 aaKnown RBP11.61□□□□□ -0.55
CLCF1-202ENST00000533438 ZCCHC14Q8WYQ9 949 aaKnown RBP11.61□□□□□ -0.55
CLCF1-202ENST00000533438 SLC6A18Q96N87 628 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 ERGIC2Q96RQ1 377 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 PSMB7Q99436 277 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 SIK2Q9H0K1 926 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 TMPRSS4Q9NRS4 437 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 SARDHQ9UL12 918 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 TPX2Q9ULW0 747 aaKnown RBP11.61□□□□□ -0.55
CLCF1-202ENST00000533438 LHX6Q9UPM6 363 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 HS3ST2Q9Y278 367 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 BTBD3Q9Y2F9 522 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 GPSM3Q9Y4H4 160 aa11.61□□□□□ -0.55
CLCF1-202ENST00000533438 GCN1Q92616 2671 aaKnown RBP11.61□□□□□ -0.55
CLCF1-202ENST00000533438 A0A1W2PQC6 194 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 A0A1W2PR77 199 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 FAM170AA1A519 330 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 H0Y8X5 98 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 KCNK3O14649 394 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 WNT9AO14904 365 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 MCF2LO15068 1137 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 ALOX15BO15296 676 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 SLC7A4O43246 635 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 TEX33O43247 280 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 LATO43561 262 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 PCDHGA12O60330 932 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 CYP1A1P04798 512 aaPredicted RBP11.6□□□□□ -0.55
CLCF1-202ENST00000533438 SRCP12931 536 aa11.6□□□□□ -0.55
CLCF1-202ENST00000533438 CD38P28907 300 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms