RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SLC30A5Q8TAD4 765 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 EPS8L1Q8TE68 723 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 ERVMER34-1Q9H9K5 563 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 POLR1BQ9H9Y6 1135 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 AASDHPPTQ9NRN7 309 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 PLA2G4CQ9UP65 541 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 PCDHA13Q9Y5I0 950 aa11.71□□□□□ -0.53
TRAPPC4-213ENST00000533149 CCP110O43303 1012 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 IPO7O95373 1038 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 KRT10P13645 584 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 RXRGP48443 463 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 PGFP49763 221 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 NDST1P52848 882 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 RAD23BP54727 409 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 CDR2Q01850 454 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 PDE4CQ08493 712 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 SLC18A3Q16572 532 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 FNDC3BQ53EP0 1204 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 CCDC122Q5T0U0 273 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 KIAA1614Q5VZ46 1190 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 USP30Q70CQ3 517 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 TADA2BQ86TJ2 420 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 FAM35AQ86V20 835 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 SLC4A11Q8NBS3 891 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 SORCS1Q8WY21 1168 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 TNIP3Q96KP6 325 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 DEPDC7Q96QD5 511 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 PCDHB18PQ96TA0 734 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 TMEM245Q9H330 911 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 SEPT11Q9NVA2 429 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 SEPT3Q9UH03 358 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 SCML1Q9UN30 329 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 PCDHB1Q9Y5F3 818 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 PTPN13Q12923 2485 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 MYH10P35580 1976 aa11.7□□□□□ -0.54
TRAPPC4-213ENST00000533149 FAM47DPA6NHR8 397 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 THAP12O43422 761 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 ZNF500O60304 480 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 USP12O75317 370 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 AP1G2O75843 785 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 STC2O76061 302 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 WNT1P04628 370 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 MMEP08473 750 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 PAEPP09466 180 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 FMO1Q01740 532 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 INCA1Q0VD86 236 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 PROX2Q3B8N5 592 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 SGO2Q562F6 1265 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 C10orf120Q5SQS8 335 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 ZNF776Q68DI1 518 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 ALKBH5Q6P6C2 394 aaKnown RBP11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 CCDC81Q6ZN84 652 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 KIAA1328Q86T90 577 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 ZNF677Q86XU0 584 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 ZNF606Q8WXB4 792 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 P2RY11Q96G91 374 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 VCPIP1Q96JH7 1222 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 PPP1R13BQ96KQ4 1090 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 TWNKQ96RR1 684 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 DCLK3Q9C098 648 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 KRT82Q9NSB4 513 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 NAGPAQ9UK23 515 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 TPX2Q9ULW0 747 aaKnown RBP11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 NENFQ9UMX5 172 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 SCML2Q9UQR0 700 aa11.69□□□□□ -0.54
TRAPPC4-213ENST00000533149 A0A0U1RQJ8 604 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 RCCD1A6NED2 376 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 LRRC72A6NJI9 287 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 TLR4O00206 839 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 RARGP13631 454 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 CD19P15391 556 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 GNA15P30679 374 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 NXPH1P58417 271 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 COG7P83436 770 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 BNIP3Q12983 259 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 ZNF211Q13398 564 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 SERINC3Q13530 473 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 CDCP2Q5VXM1 449 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 TMEM215Q68D42 235 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 IGF2-ASQ6U949 168 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 PAQR9Q6ZVX9 377 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 UNC93AQ86WB7 457 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 GANCQ8TET4 914 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 TFAP2BQ92481 460 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 HEXIM2Q96MH2 286 aaKnown RBP11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 ZSWIM1Q9BR11 485 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 NT5C1AQ9BXI3 368 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 PDCL3Q9H2J4 239 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 ASCL3Q9NQ33 180 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 PRSS16Q9NQE7 514 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 OSER1Q9NX31 292 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 TAS2R14Q9NYV8 317 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 HMGXB4Q9UGU5 601 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 SUN2Q9UH99 717 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 KIAA1257Q9ULG3 409 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 TFR2Q9UP52 801 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 NUMA1Q14980 2115 aa11.68□□□□□ -0.54
TRAPPC4-213ENST00000533149 A0A1W2PR77 199 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 TMCO5BA8MYB1 307 aa11.67□□□□□ -0.54
TRAPPC4-213ENST00000533149 SUV39H1O43463 412 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms