RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 PCDH15Q96QU1 1955 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 TPRP12270 2363 aaKnown RBP17.66■□□□□ 0.42
PHRF1-204ENST00000532550 A0A0D9SEW6 157 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 A0A1W2PQC6 194 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 ILVBLA1L0T0 632 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 UPK3BL1B0FP48 263 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 UPK3BL2E5RIL1 263 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 MCF2LO15068 1137 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 BNIP3LO60238 219 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 SNAP91O60641 907 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 PTMSP20962 102 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 CSNK1EP49674 416 aaKnown RBP17.66■□□□□ 0.42
PHRF1-204ENST00000532550 SLC14A1Q13336 389 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 TEAD4Q15561 434 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 RAB6CQ53S08 254 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 PPP1R2P3Q6NXS1 205 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 DNAJC24Q6P3W2 148 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 NCEH1Q6PIU2 408 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 IL27RAQ6UWB1 636 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-204ENST00000532550 ZNF783Q6ZMS7 281 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 MON1BQ7L1V2 547 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 OR2T34Q8NGX1 318 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 OR14C36Q8NHC7 312 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 BAP1Q92560 729 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 CCDC114Q96M63 670 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 NAP1L5Q96NT1 182 aaPredicted RBP17.66■□□□□ 0.42
PHRF1-204ENST00000532550 PSMB7Q99436 277 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 RAB6CQ9H0N0 254 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 OSBPL2Q9H1P3 480 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 OSGEPQ9NPF4 335 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 VPS51Q9UID3 782 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 HS3ST2Q9Y278 367 aa17.66■□□□□ 0.42
PHRF1-204ENST00000532550 A0A1B0GTH6 734 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 LRRC53A6NM62 1247 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 CBX4O00257 560 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 ALOX15BO15296 676 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 MT-CO1P00395 513 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 SRCP12931 536 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 NR1I3Q14994 352 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 ASIC2Q16515 512 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 SFMBT2Q5VUG0 894 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 RETSATQ6NUM9 610 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 RWDD4Q6NW29 188 aaKnown RBP17.65■□□□□ 0.42
PHRF1-204ENST00000532550 DCUN1D2Q6PH85 259 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 Q6ZVU0 165 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 MCOLN2Q8IZK6 566 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 AADATQ8N5Z0 425 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 DCAF4L2Q8NA75 395 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 RETREG1Q9H6L5 497 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 TM9SF3Q9HD45 589 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 PPM1HQ9ULR3 514 aa17.65■□□□□ 0.42
PHRF1-204ENST00000532550 TBC1D3DA0A087WVF3 549 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 TBC1D3IA0A087WXS9 549 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 TBC1D3EA0A087X179 549 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 TBC1D3KA0A087X1G2 549 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 A0A1B0GVT2 93 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 TBC1D3FA6NER0 549 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-204ENST00000532550 TBC1D3LB9A6J9 549 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 C1QTNF3-AMACRE9PGA6 284 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 CER1O95813 267 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 PLEKP08567 350 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-204ENST00000532550 TBC1D3HP0C7X1 549 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 DESP17661 470 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 CLCN6P51797 869 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 ZNF143P52747 638 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-204ENST00000532550 HDAC4P56524 1084 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 NRG1Q02297 640 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-204ENST00000532550 SLC20A2Q08357 652 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 ZNF252P-AS1Q0IIN9 211 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 TBC1D3GQ6DHY5 549 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 TBC1D3CQ6IPX1 549 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 SCYL2Q6P3W7 929 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 LINGO4Q6UY18 593 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 SLFN11Q7Z7L1 901 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 PIP4P1Q86T03 277 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 DRC7Q8IY82 874 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 TBC1D3Q8IZP1 549 aaPredicted RBP17.64■□□□□ 0.41
PHRF1-204ENST00000532550 OR7D4Q8NG98 312 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 PIP4K2CQ8TBX8 421 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 VCPIP1Q96JH7 1222 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 MCEEQ96PE7 176 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 EDEM3Q9BZQ6 932 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 GAREM1Q9H706 876 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 CBX8Q9HC52 389 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 ATP13A1Q9HD20 1204 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 AIPL1Q9NZN9 384 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 SARDHQ9UL12 918 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 CABIN1Q9Y6J0 2220 aa17.64■□□□□ 0.41
PHRF1-204ENST00000532550 A0A1W2PPC4 97 aa17.63■□□□□ 0.41
PHRF1-204ENST00000532550 TMCO5BA8MYB1 307 aa17.63■□□□□ 0.41
PHRF1-204ENST00000532550 SMAD6O43541 496 aaKnown RBP17.63■□□□□ 0.41
PHRF1-204ENST00000532550 GJB3O75712 270 aa17.63■□□□□ 0.41
PHRF1-204ENST00000532550 IGHV4-34P06331 123 aa17.63■□□□□ 0.41
PHRF1-204ENST00000532550 CD59P13987 128 aa17.63■□□□□ 0.41
PHRF1-204ENST00000532550 RHOQP17081 205 aa17.63■□□□□ 0.41
PHRF1-204ENST00000532550 RRM1P23921 792 aa17.63■□□□□ 0.41
PHRF1-204ENST00000532550 ETFBP38117 255 aa17.63■□□□□ 0.41
PHRF1-204ENST00000532550 RECQLP46063 649 aaPredicted RBP17.63■□□□□ 0.41
PHRF1-204ENST00000532550 GRIA4P48058 902 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms