RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 KLHL14Q9P2G3 628 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 CTNNAL1Q9UBT7 734 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 MID2Q9UJV3 735 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 GRID1Q9ULK0 1009 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 ARL2BPQ9Y2Y0 163 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 USP15Q9Y4E8 981 aaPredicted RBP12.54□□□□□ -0.4
CHD7-211ENST00000532149 VWA8A3KMH1 1905 aa12.54□□□□□ -0.4
CHD7-211ENST00000532149 MYO16Q9Y6X6 1858 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 CXorf51AA0A1B0GTR3 108 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 I6L893 689 aaPredicted RBP12.53□□□□□ -0.4
CHD7-211ENST00000532149 COPEO14579 308 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 KIAA0355O15063 1070 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 ZBTB24O43167 697 aaPredicted RBP12.53□□□□□ -0.4
CHD7-211ENST00000532149 SNX3O60493 162 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 TLR5O60602 858 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 ATP5HO75947 161 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 TGDSO95455 350 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 TIMP1P01033 207 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 EPOP01588 193 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 JCHAINP01591 159 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 OR4Q2P0C623 313 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 ELF1P32519 619 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 CRHR1P34998 444 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 GP5P40197 560 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 PBX3P40426 434 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 CCNFP41002 786 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 CORO7P57737 925 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 IL10RBQ08334 325 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 CAMK2BQ13554 666 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 RAB33AQ14088 237 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 CRYMQ14894 314 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 TAF12Q16514 161 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 PCID2Q5JVF3 399 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 RTP2Q5QGT7 225 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 HECTD3Q5T447 861 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 ATG16L1Q676U5 607 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 PDPK2PQ6A1A2 396 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 RNF19BQ6ZMZ0 732 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 CTU1Q7Z7A3 348 aaKnown RBP12.53□□□□□ -0.4
CHD7-211ENST00000532149 IGDCC3Q8IVU1 814 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 ARHGAP12Q8IWW6 846 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 TEX26Q8N6G2 289 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 ANKRD42Q8N9B4 389 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHD7-211ENST00000532149 ZNF333Q96JL9 665 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 SEPT5Q99719 369 aaPredicted RBP12.53□□□□□ -0.4
CHD7-211ENST00000532149 SIKE1Q9BRV8 207 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 WDR83Q9BRX9 315 aaKnown RBP12.53□□□□□ -0.4
CHD7-211ENST00000532149 TUBB6Q9BUF5 446 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 KIFC1Q9BW19 673 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 MAGEB5Q9BZ81 275 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 MAGEH1Q9H213 219 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 FAM96AQ9H5X1 160 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 CWH43Q9H720 699 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 ANLNQ9NQW6 1124 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 OSER1Q9NX31 292 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 WBP1LQ9NX94 342 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 ZFATQ9P243 1243 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 SFMBT1Q9UHJ3 866 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 IPO11Q9UI26 975 aaKnown RBP12.53□□□□□ -0.4
CHD7-211ENST00000532149 SOX13Q9UN79 622 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 NEU3Q9UQ49 428 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 CDY1Q9Y6F8 540 aa12.53□□□□□ -0.4
CHD7-211ENST00000532149 SOBPA7XYQ1 873 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 TCP11X1B4DZS4 312 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 F5H5T6 163 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 KCNK1O00180 336 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 DFFAO00273 331 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 AVILO75366 819 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 SNUPNO95149 360 aaKnown RBP12.52□□□□□ -0.41
CHD7-211ENST00000532149 PAPSS2O95340 614 aaPredicted RBP12.52□□□□□ -0.41
CHD7-211ENST00000532149 C1QAP02745 245 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 URODP06132 367 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 TROVE2P10155 538 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHD7-211ENST00000532149 GAD2Q05329 585 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 CCDC15Q0P6D6 951 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 EFEMP1Q12805 493 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 DUSP4Q13115 394 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 TRIM60Q495X7 471 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 LACTB2Q53H82 288 aaPredicted RBP12.52□□□□□ -0.41
CHD7-211ENST00000532149 MS4A13Q5J8X5 152 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 HP1BP3Q5SSJ5 553 aaPredicted RBP12.52□□□□□ -0.41
CHD7-211ENST00000532149 UBAP2Q5T6F2 1119 aaKnown RBP12.52□□□□□ -0.41
CHD7-211ENST00000532149 FAXCQ5TGI0 409 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 MARC1Q5VT66 337 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 CHST9Q7L1S5 443 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 TCEAL8Q8IYN2 117 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 LRRC34Q8IZ02 419 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 ZNF683Q8IZ20 524 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 SLC39A11Q8N1S5 342 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 NPWQ8N729 165 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 ZSCAN18Q8TBC5 510 aaPredicted RBP12.52□□□□□ -0.41
CHD7-211ENST00000532149 CALML6Q8TD86 181 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 ARNTL2Q8WYA1 636 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 ZBTB9Q96C00 473 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 CERS2Q96G23 380 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 AGAP3Q96P47 875 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 RANBP9Q96S59 729 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 C11orf49Q9H6J7 331 aa12.52□□□□□ -0.41
CHD7-211ENST00000532149 ZNF510Q9Y2H8 683 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms