RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 PORP16435 677 aaPredicted RBP3.22□□□□□ -1.89
CD44-234ENST00000531873 HOXB9P17482 250 aaPredicted RBP3.22□□□□□ -1.89
CD44-234ENST00000531873 TGM2P21980 687 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 VPS41P49754 854 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 NLRP5P59047 1200 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 MRPS35P82673 323 aaKnown RBP3.22□□□□□ -1.89
CD44-234ENST00000531873 RHAGQ02094 409 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 HNRNPA0Q13151 305 aaKnown RBP3.22□□□□□ -1.89
CD44-234ENST00000531873 CUL4AQ13619 759 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 ACVR2BQ13705 512 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 SLC18A3Q16572 532 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 ERCC6LQ2NKX8 1250 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 AWAT1Q58HT5 328 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 IGFL4Q6B9Z1 124 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 DCDC5Q6ZRR9 648 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 SZRD1Q7Z422 152 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 NEK8Q86SG6 692 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 TMEM200AQ86VY9 491 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 LCORLQ8N3X6 602 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 OR52N4Q8NGI2 321 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 CNOT9Q92600 299 aaKnown RBP3.22□□□□□ -1.89
CD44-234ENST00000531873 USP6NLQ92738 828 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 CUL5Q93034 780 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 KLHL29Q96CT2 875 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 KIF1BPQ96EK5 621 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 HIC2Q96JB3 615 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 KLHL15Q96M94 604 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 FYTTD1Q96QD9 318 aaKnown RBP3.22□□□□□ -1.89
CD44-234ENST00000531873 HEMGNQ9BXL5 484 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 GLIS2Q9BZE0 524 aaPredicted RBP3.22□□□□□ -1.89
CD44-234ENST00000531873 CCDC68Q9H2F9 335 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 PDCL3Q9H2J4 239 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 SLC32A1Q9H598 525 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 SCPEP1Q9HB40 452 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 Q9N2J8 555 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 MPP6Q9NZW5 540 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 ADD3Q9UEY8 706 aaKnown RBP3.22□□□□□ -1.89
CD44-234ENST00000531873 SLC25A13Q9UJS0 675 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 TTLL3Q9Y4R7 772 aa3.22□□□□□ -1.89
CD44-234ENST00000531873 SPATA31A5Q5VU36 1347 aa3.21□□□□□ -1.89
CD44-234ENST00000531873 SPATA31A6Q5VVP1 1343 aa3.21□□□□□ -1.89
CD44-234ENST00000531873 SPATA31A7Q8IWB4 1347 aa3.21□□□□□ -1.89
CD44-234ENST00000531873 RUSC2Q8N2Y8 1516 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 TEX13CA0A0J9YWL9 993 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 hCG_1807616A0A1W2PRN6 198 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 TTC34A8MYJ7 566 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 H7C1Q1 480 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 GCOM1H8Y6P7 765 aaPredicted RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 GTPBP1O00178 669 aaKnown RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 AP3D1O14617 1153 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 TCERG1O14776 1098 aaKnown RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 HBP1O60381 514 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 CCNT1O60563 726 aaKnown RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 EXOC3O60645 756 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 TACC1O75410 805 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 ZNF202O95125 648 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 COX7A2P14406 83 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 GSTM2P28161 218 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 ARL3P36405 182 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 PBX3P40426 434 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 ARL1P40616 181 aaPredicted RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 SOX2P48431 317 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 SIM1P81133 766 aaPredicted RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 CREB5Q02930 508 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 ABHD18Q0P651 414 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 KLF10Q13118 480 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 FOXE3Q13461 319 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 MAMLD1Q13495 774 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 KPNB1Q14974 876 aaKnown RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 PTPAQ15257 358 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 RPE65Q16518 533 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 GPR162Q16538 588 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 ARL13AQ5H913 290 aaPredicted RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 ZKSCAN2Q63HK3 967 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 TMEM81Q6P7N7 255 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 Q6ZPA2 131 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 ZNF804AQ7Z570 1209 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 RASAL3Q86YV0 1011 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 RHPN2Q8IUC4 686 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 VRK3Q8IV63 474 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 PAQR4Q8N4S7 273 aaPredicted RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 TTC39CQ8N584 583 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 SCAIQ8N9R8 606 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 IP6K1Q92551 441 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 CELF1Q92879 486 aaKnown RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 P2RY11Q96G91 374 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 C5orf34Q96MH7 638 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 HS6ST2Q96MM7 605 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 ABHD14AQ9BUJ0 271 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 MLXIPLQ9NP71 852 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 EIF2B3Q9NR50 452 aaKnown RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 DIAPH3Q9NSV4 1193 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.21□□□□□ -1.9
CD44-234ENST00000531873 ARL15Q9NXU5 204 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 NKIRAS2Q9NYR9 191 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 LRIT1Q9P2V4 623 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 PEMTQ9UBM1 199 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 SLCO3A1Q9UIG8 710 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 ADAM21Q9UKJ8 722 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms