RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ATP9BO43861 1147 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 CLDN11O75508 207 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 ERBB2P04626 1255 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 C1SP09871 688 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 PRLRP16471 622 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 SLC9A1P19634 815 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 KRT9P35527 623 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 SULT1E1P49888 294 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 PLK1P53350 603 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 KRT83P78385 493 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 DAB2P98082 770 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 PTK2Q05397 1052 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 TARDBPQ13148 414 aaKnown RBP eCLIP16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 EXOC3L4Q17RC7 722 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 OLFML1Q6UWY5 402 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 LRRC69Q6ZNQ3 347 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 IQCHQ86VS3 1027 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 SPATS2Q86XZ4 545 aaKnown RBP16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 ATP11CQ8NB49 1132 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 OR52K2Q8NGK3 314 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 FEM1AQ9BSK4 669 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 C2orf49Q9BVC5 232 aaPredicted RBP16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 PDCL3Q9H2J4 239 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 ERVMER34-1Q9H9K5 563 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 PREBQ9HCU5 417 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 HS3ST4Q9Y661 456 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 LOC400499M0QZD8 3231 aa16.24■□□□□ 0.19
CHMP4A-204ENST00000530996 LAMA5O15230 3695 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 A0A087WV48 116 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 PRAMEF26H0Y7S4 382 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 SLC31A1O15431 190 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 FFAR2O15552 330 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 RNGTTO60942 597 aaKnown RBP16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 PAGE1O75459 146 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 MTIF2P46199 727 aaKnown RBP16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 CDH4P55283 916 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 RNASE9P60153 205 aaKnown RBP16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 OVGP1Q12889 678 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 TPD52L1Q16890 204 aaPredicted RBP16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 SFMBT2Q5VUG0 894 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 SH2D3CQ8N5H7 860 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 GRIN3AQ8TCU5 1115 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 SHC3Q92529 594 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 KLK6Q92876 244 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 CALN1Q9BXU9 219 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 PLCB1Q9NQ66 1216 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 RWDD2AQ9UIY3 292 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 STAP1Q9ULZ2 295 aa16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 COL5A1P20908 1838 aaPredicted RBP16.23■□□□□ 0.19
CHMP4A-204ENST00000530996 NYNRINQ9P2P1 1898 aaKnown RBP16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 KNL1Q8NG31 2342 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 MCF2LO15068 1137 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 RRP8O43159 456 aaKnown RBP16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 SNAP91O60641 907 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 ADCY5O95622 1261 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 THEGLP0DJG4 465 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 CKMT2P17540 419 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 RRM1P23921 792 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 RECQLP46063 649 aaPredicted RBP16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 RXRGP48443 463 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 CCDC15Q0P6D6 951 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 EIF4EBP2Q13542 120 aaPredicted RBP16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 PTPN20Q4JDL3 420 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 LRRC31Q6UY01 552 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 SLC26A9Q7LBE3 791 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 TFAP2DQ7Z6R9 452 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 BAP1Q92560 729 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 KLHDC7BQ96G42 594 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 TKTL2Q9H0I9 626 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 FZD3Q9NPG1 666 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 PIGVQ9NUD9 493 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 ARHGAP20Q9P2F6 1191 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 VPS51Q9UID3 782 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 PPM1HQ9ULR3 514 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 PCDHGC3Q9UN70 934 aa16.22■□□□□ 0.19
CHMP4A-204ENST00000530996 A0A1W2PQU0 124 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 GADD45BO75293 160 aaPredicted RBP16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 CNTN5O94779 1100 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 PCDH8O95206 1070 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 PNMA6AP0CW24 399 aaPredicted RBP16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 SRCP12931 536 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 GLDCP23378 1020 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 AKT2P31751 481 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 NOS2P35228 1153 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 SLC6A3Q01959 620 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 ILKQ13418 452 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 RAPGEF1Q13905 1077 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 FBXL19Q6PCT2 694 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 LINGO4Q6UY18 593 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 C14orf80Q86SX3 495 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 WDTC1Q8N5D0 677 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 TSC1Q92574 1164 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 FAM131CQ96AQ9 280 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 ALG14Q96F25 216 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 PPP1R16AQ96I34 528 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 BBC3Q96PG8 261 aaPredicted RBP16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 WDCPQ9H6R7 721 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 HS3ST2Q9Y278 367 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 PAXBP1Q9Y5B6 917 aa16.21■□□□□ 0.19
CHMP4A-204ENST00000530996 CABIN1Q9Y6J0 2220 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms